Web Microanalysis of Big Image Data

Web Microanalysis of Big Image Data

Author: Peter Bajcsy

Publisher: Springer

Published: 2018-01-22

Total Pages: 211

ISBN-13: 3319633600

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This book looks at the increasing interest in running microscopy processing algorithms on big image data by presenting the theoretical and architectural underpinnings of a web image processing pipeline (WIPP). Software-based methods and infrastructure components for processing big data microscopy experiments are presented to demonstrate how information processing of repetitive, laborious and tedious analysis can be automated with a user-friendly system. Interactions of web system components and their impact on computational scalability, provenance information gathering, interactive display, and computing are explained in a top-down presentation of technical details. Web Microanalysis of Big Image Data includes descriptions of WIPP functionalities, use cases, and components of the web software system (web server and client architecture, algorithms, and hardware-software dependencies). The book comes with test image collections and a web software system to increase the reader's understanding and to provide practical tools for conducting big image experiments. By providing educational materials and software tools at the intersection of microscopy image analyses and computational science, graduate students, postdoctoral students, and scientists will benefit from the practical experiences, as well as theoretical insights. Furthermore, the book provides software and test data, empowering students and scientists with tools to make discoveries with higher statistical significance. Once they become familiar with the web image processing components, they can extend and re-purpose the existing software to new types of analyses. Each chapter follows a top-down presentation, starting with a short introduction and a classification of related methods. Next, a description of the specific method used in accompanying software is presented. For several topics, examples of how the specific method is applied to a dataset (parameters, RAM requirements, CPU efficiency) are shown. Some tips are provided as practical suggestions to improve accuracy or computational performance.


Epigenetics and Proteomics of Leukemia

Epigenetics and Proteomics of Leukemia

Author: R ̄uta Navakauskien ̇e

Publisher: Springer Nature

Published: 2021-09-14

Total Pages: 453

ISBN-13: 3030687082

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This book reviews the current state of epigenetics and proteomics of leukemia and introduces the methods that are important to process and evaluate these factors in leukemia. In particular, epigenetic modifiers and their inhibitors in leukemia treatment as well as approaches to the epigenetic treatment of leukemia are covered. Various computational methods for proteome analysis are also described in detail, including 2DE fractionation and visualization, proteomic data processing, image acquisition and data anlaysis, and more. Protein localization in leukemia is also covered, in addition to the future of leukemia therapy. Epigenetics and Proteomics of Leukemia is an ideal book for advanced biomedical scientists and students, medical doctors and students, bioinformatics and health informatics researchers, computational biologists, structural biologists, systems biologists, and bioengineers.


Advances in Manufacturing, Production Management and Process Control

Advances in Manufacturing, Production Management and Process Control

Author: Stefan Trzcielinski

Publisher: Springer Nature

Published: 2021-07-03

Total Pages: 490

ISBN-13: 3030804623

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This book provides readers with a timely snapshot of human factors research and methods fostering a better integration of technologies and humans during the whole manufacturing cycle, giving a special emphasis to the quality and safety of the industrial environment for workers, the efficiency of the manufacturing processes itself, the quality of the final product, and its distribution to and use by the customers. It discusses timely issues relating to the automation of the manufacturing processes, and the challenges imposed by the implementation of industry 4.0, additive manufacturing and 3D printing technologies. Contributions cover a range of industrial sectors, such as the automotive, health and constructions ones, highlighting both organizational and engineering solutions fostering sustainability, globalization, customization, workers’ well-being and consumers’ satisfaction, among other issues. Based on the AHFE 2021 Conferences on Human Aspects of Advanced Manufacturing, Advanced Production Management and Process Control, and Additive Manufacturing, Modeling Systems and 3D Prototyping, held virtually on 25–29 July, 2021, from USA, this book, which merges ergonomic research and technical know-how in the field of manufacturing and product design, addresses a wide range of engineers, designers and professionals, dealing with the integration of technologies and humans in the factories of the future.


The Semantic Web - ISWC 2004

The Semantic Web - ISWC 2004

Author: Sheila A. McIlraith

Publisher: Springer

Published: 2004-10-19

Total Pages: 861

ISBN-13: 3540304754

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The 3rd International Semantic Web Conference (ISWC 2004) was held Nov- ber 7–11, 2004 in Hiroshima, Japan. If it is true what the proverb says: “Once by accident, twice by habit, three times by tradition,” then this third ISWC did indeed ?rmly establish a tradition. After the overwhelming interest in last year’s conference at Sanibel Island, Florida, this year’s conference showed that the Semantic Web is not just a one-day wonder, but has established itself ?rmly on the research agenda. At a time when special interest meetings with a Sem- tic Web theme are springing up at major conferences in numerous areas (ACL, VLDB, ECAI, AAAI, ECML, WWW, to name but a few), the ISWC series has established itself as the primary venue for Semantic Web research. Response to the call for papers for the conference continued to be strong. We solicited submissions to three tracks of the conference: the research track, the industrial track, and the poster track. The research track, the premier venue for basic research on the Semantic Web, received 205 submissions, of which 48 were accepted for publication. Each submission was evaluated by three p- gram committee members whose reviews were coordinated by members of the senior program committee. Final decisions were made by the program co-chairs in consultation with the conference chair and the senior program committee. The industrial track, soliciting papers describing industrial research on the - mantic Web, received 22 submissions, of which 7 were accepted for publication.


Scanning Electron Microscopy and X-Ray Microanalysis

Scanning Electron Microscopy and X-Ray Microanalysis

Author: Joseph I. Goldstein

Publisher: Springer

Published: 2017-11-17

Total Pages: 554

ISBN-13: 1493966766

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This thoroughly revised and updated Fourth Edition of a time-honored text provides the reader with a comprehensive introduction to the field of scanning electron microscopy (SEM), energy dispersive X-ray spectrometry (EDS) for elemental microanalysis, electron backscatter diffraction analysis (EBSD) for micro-crystallography, and focused ion beams. Students and academic researchers will find the text to be an authoritative and scholarly resource, while SEM operators and a diversity of practitioners — engineers, technicians, physical and biological scientists, clinicians, and technical managers — will find that every chapter has been overhauled to meet the more practical needs of the technologist and working professional. In a break with the past, this Fourth Edition de-emphasizes the design and physical operating basis of the instrumentation, including the electron sources, lenses, detectors, etc. In the modern SEM, many of the low level instrument parameters are now controlled and optimized by the microscope’s software, and user access is restricted. Although the software control system provides efficient and reproducible microscopy and microanalysis, the user must understand the parameter space wherein choices are made to achieve effective and meaningful microscopy, microanalysis, and micro-crystallography. Therefore, special emphasis is placed on beam energy, beam current, electron detector characteristics and controls, and ancillary techniques such as energy dispersive x-ray spectrometry (EDS) and electron backscatter diffraction (EBSD). With 13 years between the publication of the third and fourth editions, new coverage reflects the many improvements in the instrument and analysis techniques. The SEM has evolved into a powerful and versatile characterization platform in which morphology, elemental composition, and crystal structure can be evaluated simultaneously. Extension of the SEM into a "dual beam" platform incorporating both electron and ion columns allows precision modification of the specimen by focused ion beam milling. New coverage in the Fourth Edition includes the increasing use of field emission guns and SEM instruments with high resolution capabilities, variable pressure SEM operation, theory, and measurement of x-rays with high throughput silicon drift detector (SDD-EDS) x-ray spectrometers. In addition to powerful vendor- supplied software to support data collection and processing, the microscopist can access advanced capabilities available in free, open source software platforms, including the National Institutes of Health (NIH) ImageJ-Fiji for image processing and the National Institute of Standards and Technology (NIST) DTSA II for quantitative EDS x-ray microanalysis and spectral simulation, both of which are extensively used in this work. However, the user has a responsibility to bring intellect, curiosity, and a proper skepticism to information on a computer screen and to the entire measurement process. This book helps you to achieve this goal. Realigns the text with the needs of a diverse audience from researchers and graduate students to SEM operators and technical managers Emphasizes practical, hands-on operation of the microscope, particularly user selection of the critical operating parameters to achieve meaningful results Provides step-by-step overviews of SEM, EDS, and EBSD and checklists of critical issues for SEM imaging, EDS x-ray microanalysis, and EBSD crystallographic measurements Makes extensive use of open source software: NIH ImageJ-FIJI for image processing and NIST DTSA II for quantitative EDS x-ray microanalysis and EDS spectral simulation. Includes case studies to illustrate practical problem solving Covers Helium ion scanning microscopy Organized into relatively self-contained modules – no need to "read it all" to understand a topic Includes an online supplement—an extensive "Database of Electron–Solid Interactions"—which can be accessed on SpringerLink, in Chapter 3


Drawing multimodality’s bigger picture: Metalanguages and corpora for multimodal analyses

Drawing multimodality’s bigger picture: Metalanguages and corpora for multimodal analyses

Author: Janina Wildfeuer

Publisher: Frontiers Media SA

Published: 2024-07-30

Total Pages: 203

ISBN-13: 2832551963

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Multimodality has most recently been described no longer as a research field or discipline on its own, but rather as a “stage of development within a field” (Bateman 2022a, 49). The realization that (1) many different fields and disciplines now enter their own multimodal phase with new interest in multimodal phenomena and that (2) these disciplines all commit to the development of multimodality research with their own theoretical principles and methodological tools, brings with it not only an immense breadth of potential analytical objects, but also many new meta-methodological issues. “We need to find ways of ‘combining’ insights from the variously imported theoretical and methodological backgrounds brought along by previous non-multimodal stages of any contributing disciplines” (Bateman 2022a, 49). At the same time, the search for a meta-methodology for multimodal analyses is pushed further by the recent trend towards more empirical approaches to multimodal phenomena and the development and use of larger multimodal corpora that just as well require theoretical and methodological refinements. “We need to develop ways of strengthening claims with robustly applicable methods which nevertheless remain firmly anchored theoretically” (Bateman 2022b, 64). For a productive handling of these issues, disciplinary triangulation and finding a ‘common language’ or metalanguage (Maton & Chen 2016) for an ‘integrationist interdisciplinarity’ (van Leeuwen 2005) are the greatest challenges in contemporary multimodality research (Bateman 2022a). Also, there is a need for reconceptualizing the practice of analysis by making available large-scale corpora and broader and more complex empirical setups to fully process the ‘move from theory to data,’ and to substantiate long-lasting theoretical and methodological hypotheses (Pflaeging et al. 2021). For this project, we see these challenges productively as “a multimodal task from the ground up,” as John Bateman (2022b, 64) has phrased it in one of his most recent papers. This Research Topic will address this task by convening the most recent theoretical, methodological, practical, and empirical developments within contemporary multimodality research. The aim is to gain new insights in • the metalanguages or external languages that are currently being developed for multimodal analysis in many different research fields and disciplines, e.g., in pedagogy, literary theory, cultural studies, design, argumentation theory, computer science, and (experimental) psychology; • newest results from data collection methods and multimodal corpus analyses that expand the current quantitative work by, e.g., applying existing theories and methods to larger datasets, or exploring the newest communication technologies. We are particularly interested in seeing how works addressing these aspects contribute to finding ways of productive triangulation and integration for and within a meta-methodology for multimodality research. This Research Topic aims to bring together scholars from a variety of disciplines interested in multimodality research to review, explore, and advance the contributions that John Bateman, as one of the key figures in multimodality research, has made to both theory- and method-building as well as to the driving forward of multimodal empirical and corpus analyses. We welcome contributions that, for example, • critically address the theoretical and methodological advancements that John Bateman has made with regard to the notions of semiotic mode, discourse semantics, genre, textuality, etc.; • apply one of the many approaches that John Bateman has developed for the empirical analysis of multimodal artefacts (e.g., the GeM model for page-based documents, his work on multimodal film and audio-visual analysis, and the discourse semantics and/or annotation approach to visual narratives) to larger corpora or currently newly developing communicative situations; • expand on one of the abovementioned aspects with new ideas and insights from disciplines that have not yet been included in multimodality research.


Proceedings: Microscopy and Microanalysis 2002: Volume 8

Proceedings: Microscopy and Microanalysis 2002: Volume 8

Author: Microscopy Society of America

Publisher: Cambridge University Press

Published: 2002-12-16

Total Pages: 556

ISBN-13: 9780521824057

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This Proceedings volume contains extended abstracts of all the papers presented by microscopists in both the materials and life sciences at the Microscopy and Microanalysis 2002 meeting held in Québec City, Québec, Canada on August 4-9, 2002. The Proceedings consists of both a printed volume containing the extended abstracts of all invited papers as well as a searchable CD-ROM containing the extended abstracts of all papers presented at the meeting --whether invited or submitted, platform or poster.


Data Science for Nano Image Analysis

Data Science for Nano Image Analysis

Author: Chiwoo Park

Publisher: Springer Nature

Published: 2021-07-31

Total Pages: 376

ISBN-13: 3030728226

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This book combines two distinctive topics: data science/image analysis and materials science. The purpose of this book is to show what type of nano material problems can be better solved by which set of data science methods. The majority of material science research is thus far carried out by domain-specific experts in material engineering, chemistry/chemical engineering, and mechanical & aerospace engineering. The book could benefit materials scientists and manufacturing engineers who were not exposed to systematic data science training while in schools, or data scientists in computer science or statistics disciplines who want to work on material image problems or contribute to materials discovery and optimization. This book provides in-depth discussions of how data science and operations research methods can help and improve nano image analysis, automating the otherwise manual and time-consuming operations for material engineering and enhancing decision making for nano material exploration. A broad set of data science methods are covered, including the representations of images, shape analysis, image pattern analysis, and analysis of streaming images, change points detection, graphical methods, and real-time dynamic modeling and object tracking. The data science methods are described in the context of nano image applications, with specific material science case studies.


Nursing Informatics

Nursing Informatics

Author: Ursula H. Hübner

Publisher: Springer Nature

Published: 2022-07-25

Total Pages: 850

ISBN-13: 303091237X

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This new edition of the classic textbook on health informatics provides readers in healthcare practice and educational settings with an unparalleled depth of information on using informatics methods and tools. However, this new text speaks to nurses and — in a departure from earlier editions of this title — to all health professionals in direct patient care, regardless of their specialty, extending its usefulness as a textbook. This includes physicians, therapists, pharmacists, dieticians and many others. In recognition of the evolving digital environments in all healthcare settings and of interprofessional teams, the book is designed for a wide spectrum of healthcare professions including quality officers, health information managers, administrators and executives, as well as health information technology professionals such as engineers and computer scientists in health care. The book is of special interest to those who bridge the technical and caring domain, particularly nurse and medical informaticians and other informaticians working in the health sciences. Nursing Informatics: An Interprofessional and Global Perspective contains real-life case studies and other didactic features to illustrate the theories and principles discussed, making it an ideal resource for use within health and nursing informatics curricula at both undergraduate and graduate level, as well as for workforce development. It honors the format established by the previous editions by including a content array and questions to guide the reader. Readers are invited to look out of the box through a dedicated global perspective covering health informatics applications in different regions, countries and continents.


Advances in Visual Computing

Advances in Visual Computing

Author: George Bebis

Publisher: Springer Nature

Published: 2019-10-25

Total Pages: 609

ISBN-13: 3030337235

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This book constitutes the refereed proceedings of the 14th International Symposium on Visual Computing, ISVC 2019, held in Lake Tahoe, NV, USA in October 2019. The 100 papers presented in this double volume were carefully reviewed and selected from 163 submissions. The papers are organized into the following topical sections: Deep Learning I; Computer Graphics I; Segmentation/Recognition; Video Analysis and Event Recognition; Visualization; ST: Computational Vision, AI and Mathematical methods for Biomedical and Biological Image Analysis; Biometrics; Virtual Reality I; Applications I; ST: Vision for Remote Sensing and Infrastructure Inspection; Computer Graphics II; Applications II; Deep Learning II; Virtual Reality II; Object Recognition/Detection/Categorization; and Poster.