Gene Regulatory Mechanisms in Development and Evolution: Insights from Echinoderms
Gene Regulatory Mechanisms in Development and Evolution: Insights from Echinoderms

Author:

Publisher: Academic Press

Published: 2022-02-10

Total Pages: 252

ISBN-13: 012817188X

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Sea urchins and other echinoderms, which have been studied intensively by developmental biologists for more than a century, are currently among the most prominent models for elucidating the genomic regulatory processes that control embryogenesis and the evolution of those processes. This volume contains reviews from the world's leading researchers who are using echinoderms to address these questions. Chapters focus on gene regulatory networks that drive the differentiation and morphogenesis of major embryonic tissues such as the skeleton, muscle, nervous system, immune system, pigment cells, and germ line, and on evolutionary insights from comparative studies of these networks across echinoderms and other taxa. Other chapters comprehensively review the architecture and evolution of the cell signaling pathways that establish the early embryonic axes and on recent evolutionary changes in gene networks that have led to dramatic changes in the life history modes of echinoderms. This volume provides a comprehensive, current picture of exciting research at the interface between developmental genomics and evolution from one of the research communities leading this work. - Contributions from leading investigators who use echinoderms as model organisms - Up-to-date reviews of developmental gene regulatory networks - Current work at the interface between developmental genomics and evolution

The Regulatory Genome
The Regulatory Genome

Author: Eric H. Davidson

Publisher: Elsevier

Published: 2010-07-19

Total Pages: 303

ISBN-13: 0080455573

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Gene regulatory networks are the most complex, extensive control systems found in nature. The interaction between biology and evolution has been the subject of great interest in recent years. The author, Eric Davidson, has been instrumental in elucidating this relationship. He is a world renowned scientist and a major contributor to the field of developmental biology. The Regulatory Genome beautifully explains the control of animal development in terms of structure/function relations of inherited regulatory DNA sequence, and the emergent properties of the gene regulatory networks composed of these sequences. New insights into the mechanisms of body plan evolution are derived from considerations of the consequences of change in developmental gene regulatory networks. Examples of crucial evidence underscore each major concept. The clear writing style explains regulatory causality without requiring a sophisticated background in descriptive developmental biology. This unique text supersedes anything currently available in the market. - The only book in the market that is solely devoted to the genomic regulatory code for animal development - Written at a conceptual level, including many novel synthetic concepts that ultimately simplify understanding - Presents a comprehensive treatment of molecular control elements that determine the function of genes - Provides a comparative treatment of development, based on principles rather than description of developmental processes - Considers the evolutionary processes in terms of the structural properties of gene regulatory networks - Includes 42 full-color descriptive figures and diagrams

Genomic Regulatory Systems
Genomic Regulatory Systems

Author: Eric H. Davidson

Publisher: Elsevier

Published: 2001-01-24

Total Pages: 274

ISBN-13: 0080525598

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The interaction between biology and evolution has been the subject of great interest in recent years. Because evolution is such a highly debated topic, a biologically oriented discussion will appeal not only to scientists and biologists but also to the interested lay person. This topic will always be a subject of controversy and therefore any breaking information regarding it is of great interest.The author is a recognized expert in the field of developmental biology and has been instrumental in elucidating the relationship between biology and evolution. The study of evolution is of interest to many different kinds of people and Genomic Regulatory Systems: In Development and Evolution is written at a level that is very easy to read and understand even for the nonscientist.* Contents Include* Regulatory Hardwiring: A Brief Overview of the Genomic Control Apparatus and Its Causal Role in Development and Evolution * Inside the Cis-Regulatory Module: Control Logic and How the Regulatory Environment Is Transduced into Spatial Patterns of Gene Expression* Regulation of Direct Cell-Type Specification in Early Development* The Secret of the Bilaterians: Abstract Regulatory Design in Building Adult Body Parts* Changes That Make New Forms: Gene Regulatory Systems and the Evolution of Body Plans

The Sea Urchin Embryo
The Sea Urchin Embryo

Author: G. Czihak

Publisher: Springer Science & Business Media

Published: 2012-12-06

Total Pages: 719

ISBN-13: 3642659640

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Sea urchin eggs are objects of wonder for the student who sees them for the first time under the microscope. The formation of the fertil ization membrane after insemination, the beauty of mitotic cleavage, the elegant swimming of embryos, remain an esthetic pleasure even for the eyes of seasoned investigators. But sea urchin eggs have other, more practical, advantages: they lend themselves to surgical operation without difficulty and they heal perfectly; they can be obtained in very large amounts and represent thus an extremely favorable material for biochemists and molecular embryologists. It is not surprising that, in view of these exceptional advantages, sea urchin eggs have attracted the interest of innumerable biologists since O. HERTWIG discovered the fusion of the pronuclei (amphimixy), in Paracentrotus lividus, almost a century ago. The purpose of the present book is to present, in a complete and orderly fashion, the enormous amount of information which has been gathered, in the course of a hun dred years of sea urchin embryology. JOSEPH NEEDHAM, in 1930, was still able to present all that was known, at that time, on the biochemistry of all possible species of developing eggs and embryos in his famous "Chemical Embryology" (Cambridge University Press) . It would no longer be possible for one man to write a modern version of what was a "Bible" for the young embryologists of forty years ago.

Evolutionary Developmental Biology of Invertebrates 6
Evolutionary Developmental Biology of Invertebrates 6

Author: Andreas Wanninger

Publisher: Springer

Published: 2015-08-11

Total Pages: 220

ISBN-13: 3709118565

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This multi-author, six-volume work summarizes our current knowledge on the developmental biology of all major invertebrate animal phyla. The main aspects of cleavage, embryogenesis, organogenesis and gene expression are discussed in an evolutionary framework. Each chapter presents an in-depth yet concise overview of both classical and recent literature, supplemented by numerous color illustrations and micrographs of a given animal group. The largely taxon-based chapters are supplemented by essays on topical aspects relevant to modern-day EvoDevo research such as regeneration, embryos in the fossil record, homology in the age of genomics and the role of EvoDevo in the context of reconstructing evolutionary and phylogenetic scenarios. A list of open questions at the end of each chapter may serve as a source of inspiration for the next generation of EvoDevo scientists. Evolutionary Developmental Biology of Invertebrates is a must-have for any scientist, teacher or student interested in developmental and evolutionary biology as well as in general invertebrate zoology. This chapter is dedicated to the Deuterostomia, comprising the Echinodermata and Hemichordata (usually grouped together as the Ambulacraria) as well as the Cephalochordata and the Tunicata.

Genomic Control Process
Genomic Control Process

Author: Isabelle S. Peter

Publisher: Academic Press

Published: 2015-01-21

Total Pages: 461

ISBN-13: 0124047467

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Genomic Control Process explores the biological phenomena around genomic regulatory systems that control and shape animal development processes, and which determine the nature of evolutionary processes that affect body plan. Unifying and simplifying the descriptions of development and evolution by focusing on the causality in these processes, it provides a comprehensive method of considering genomic control across diverse biological processes. This book is essential for graduate researchers in genomics, systems biology and molecular biology seeking to understand deep biological processes which regulate the structure of animals during development. - Covers a vast area of current biological research to produce a genome oriented regulatory bioscience of animal life - Places gene regulation, embryonic and postembryonic development, and evolution of the body plan in a unified conceptual framework - Provides the conceptual keys to interpret a broad developmental and evolutionary landscape with precise experimental illustrations drawn from contemporary literature - Includes a range of material, from developmental phenomenology to quantitative and logic models, from phylogenetics to the molecular biology of gene regulation, from animal models of all kinds to evidence of every relevant type - Demonstrates the causal power of system-level understanding of genomic control process - Conceptually organizes a constellation of complex and diverse biological phenomena - Investigates fundamental developmental control system logic in diverse circumstances and expresses these in conceptual models - Explores mechanistic evolutionary processes, illuminating the evolutionary consequences of developmental control systems as they are encoded in the genome

From Embryology to Evo-devo
From Embryology to Evo-devo

Author: Manfred Dietrich Laubichler

Publisher: MIT Press (MA)

Published: 2007

Total Pages: 592

ISBN-13:

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Historians, philosophers, sociologists, and biologists explore the history of the idea that embryological development and evolution are linked.

Embryology
Embryology

Author: Scott F. Gilbert

Publisher: Sinauer Associates Incorporated

Published: 1997-01-01

Total Pages: 537

ISBN-13: 9780878932375

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A textbook for a laboratory-based, sophomore-level course. Discusses species the development of which is little understood on a cellular or molecular level as well as the conventional examples used in developmental biology courses. Emphasizes both the similarities between groups of organisms and the differences that make each group unique. Annotation copyrighted by Book News, Inc., Portland, OR

Echinoderms Part B
Echinoderms Part B

Author:

Publisher: Academic Press

Published: 2019-04-02

Total Pages: 552

ISBN-13: 0128170735

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Echinoderms, Volume 151, the latest release in the Methods in Cell Biology series, highlights advances in the field, with this update presenting chapters on Echinoderm Genome Databases, analysis of gene regulatory networks, using ATAC-seq and RNA-seq to increase resolution in GRN connectivity, multiplex cis-regulatory analysis, experimental approaches GRN/signal pathways, BACs, analysis of chromatin accessibility using ATAC-seq, analysis of sea urchin proteins /Click IT, CRISPR/Cas9-mediated genome editing in sea urchins, super-resolution and in toto imaging of echinoderm embryos, and methods for analysis of intracellular ion signals in sperm, eggs and embryos. - Presents clear, concise protocols provided by experts who have established the echinoderms as a model systems - Highlights new advances in the field, with this update presenting interesting chapters on echinoderms