Riemannian Geometric Statistics in Medical Image Analysis

Riemannian Geometric Statistics in Medical Image Analysis

Author: Xavier Pennec

Publisher: Academic Press

Published: 2019-09-02

Total Pages: 636

ISBN-13: 0128147261

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Over the past 15 years, there has been a growing need in the medical image computing community for principled methods to process nonlinear geometric data. Riemannian geometry has emerged as one of the most powerful mathematical and computational frameworks for analyzing such data. Riemannian Geometric Statistics in Medical Image Analysis is a complete reference on statistics on Riemannian manifolds and more general nonlinear spaces with applications in medical image analysis. It provides an introduction to the core methodology followed by a presentation of state-of-the-art methods. Beyond medical image computing, the methods described in this book may also apply to other domains such as signal processing, computer vision, geometric deep learning, and other domains where statistics on geometric features appear. As such, the presented core methodology takes its place in the field of geometric statistics, the statistical analysis of data being elements of nonlinear geometric spaces. The foundational material and the advanced techniques presented in the later parts of the book can be useful in domains outside medical imaging and present important applications of geometric statistics methodology Content includes: - The foundations of Riemannian geometric methods for statistics on manifolds with emphasis on concepts rather than on proofs - Applications of statistics on manifolds and shape spaces in medical image computing - Diffeomorphic deformations and their applications As the methods described apply to domains such as signal processing (radar signal processing and brain computer interaction), computer vision (object and face recognition), and other domains where statistics of geometric features appear, this book is suitable for researchers and graduate students in medical imaging, engineering and computer science. - A complete reference covering both the foundations and state-of-the-art methods - Edited and authored by leading researchers in the field - Contains theory, examples, applications, and algorithms - Gives an overview of current research challenges and future applications


Geometric Methods in Bio-Medical Image Processing

Geometric Methods in Bio-Medical Image Processing

Author: Ravikanth Malladi

Publisher: Springer Science & Business Media

Published: 2012-12-06

Total Pages: 151

ISBN-13: 3642559875

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The genesis of this book goes back to the conference held at the University of Bologna, June 1999, on collaborative work between the University of California at Berkeley and the University of Bologna. The book, in its present form, is a compilation of some of the recent work using geometric partial differential equations and the level set methodology in medical and biomedical image analysis. The book not only gives a good overview on some of the traditional applications in medical imagery such as, CT, MR, Ultrasound, but also shows some new and exciting applications in the area of Life Sciences, such as confocal microscope image understanding.


Handbook of Biomedical Image Analysis

Handbook of Biomedical Image Analysis

Author: David Wilson

Publisher: Springer Science & Business Media

Published: 2007-04-25

Total Pages: 583

ISBN-13: 0306486083

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Our goal is to develop automated methods for the segmentation of thr- dimensional biomedical images. Here, we describe the segmentation of c- focal microscopy images of bee brains (20 individuals) by registration to one or several atlas images. Registration is performed by a highly parallel imp- mentation of an entropy-based nonrigid registration algorithm using B-spline transformations. We present and evaluate different methods to solve the cor- spondence problem in atlas based registration. An image can be segmented by registering it to an individual atlas, an average atlas, or multiple atlases. When registering to multiple atlases, combining the individual segmentations into a ?nalsegmentationcanbeachievedbyatlasselection,ormulticlassi?erdecision fusion. Wedescribeallthesemethodsandevaluatethesegmentationaccuracies that they achieve by performing experiments with electronic phantoms as well as by comparing their outputs to a manual gold standard. The present work is focused on the mathematical and computational t- ory behind a technique for deformable image registration termed Hyperelastic Warping, and demonstration of the technique via applications in image regist- tion and strain measurement. The approach combines well-established prin- ples of nonlinear continuum mechanics with forces derived directly from thr- dimensional image data to achieve registration. The general approach does not require the de?nition of landmarks, ?ducials, or surfaces, although it can - commodate these if available. Representative problems demonstrate the robust and ?exible nature of the approach. Three-dimensional registration methods are introduced for registering MRI volumes of the pelvis and prostate. The chapter ?rst reviews the applications, xi xii Preface challenges, and previous methods of image registration in the prostate.


Image Processing and Analysis

Image Processing and Analysis

Author: Tony F. Chan

Publisher: SIAM

Published: 2005-09-01

Total Pages: 414

ISBN-13: 089871589X

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This book develops the mathematical foundation of modern image processing and low-level computer vision, bridging contemporary mathematics with state-of-the-art methodologies in modern image processing, whilst organizing contemporary literature into a coherent and logical structure. The authors have integrated the diversity of modern image processing approaches by revealing the few common threads that connect them to Fourier and spectral analysis, the machinery that image processing has been traditionally built on. The text is systematic and well organized: the geometric, functional, and atomic structures of images are investigated, before moving to a rigorous development and analysis of several image processors. The book is comprehensive and integrative, covering the four most powerful classes of mathematical tools in contemporary image analysis and processing while exploring their intrinsic connections and integration. The material is balanced in theory and computation, following a solid theoretical analysis of model building and performance with computational implementation and numerical examples.


Introduction to the Mathematics of Medical Imaging

Introduction to the Mathematics of Medical Imaging

Author: Charles L. Epstein

Publisher: SIAM

Published: 2008-01-01

Total Pages: 794

ISBN-13: 9780898717792

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At the heart of every medical imaging technology is a sophisticated mathematical model of the measurement process and an algorithm to reconstruct an image from the measured data. This book provides a firm foundation in the mathematical tools used to model the measurements and derive the reconstruction algorithms used in most of these modalities. The text uses X-ray computed tomography (X-ray CT) as a 'pedagogical machine' to illustrate important ideas and its extensive discussion of background material makes the more advanced mathematical topics accessible to people with a less formal mathematical education. This new edition contains a chapter on magnetic resonance imaging (MRI), a revised section on the relationship between the continuum and discrete Fourier transforms, an improved description of the gridding method, and new sections on both Grangreat's formula and noise analysis in MR-imaging. Mathematical concepts are illuminated with over 200 illustrations and numerous exercises.


Computer Vision and Mathematical Methods in Medical and Biomedical Image Analysis

Computer Vision and Mathematical Methods in Medical and Biomedical Image Analysis

Author: Milan Sonka

Publisher: Springer Science & Business Media

Published: 2004-09-20

Total Pages: 448

ISBN-13: 3540226753

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Medical imaging and medical image analysisare rapidly developing. While m- ical imaging has already become a standard of modern medical care, medical image analysis is still mostly performed visually and qualitatively. The ev- increasing volume of acquired data makes it impossible to utilize them in full. Equally important, the visual approaches to medical image analysis are known to su?er from a lack of reproducibility. A signi?cant researche?ort is devoted to developing algorithms for processing the wealth of data available and extracting the relevant information in a computerized and quantitative fashion. Medical imaging and image analysis are interdisciplinary areas combining electrical, computer, and biomedical engineering; computer science; mathem- ics; physics; statistics; biology; medicine; and other ?elds. Medical imaging and computer vision, interestingly enough, have developed and continue developing somewhat independently. Nevertheless, bringing them together promises to b- e?t both of these ?elds. We were enthusiastic when the organizers of the 2004 European Conference on Computer Vision (ECCV) allowed us to organize a satellite workshop devoted to medical image analysis.


Biomedical Image Analysis and Machine Learning Technologies: Applications and Techniques

Biomedical Image Analysis and Machine Learning Technologies: Applications and Techniques

Author: Gonzalez, Fabio A.

Publisher: IGI Global

Published: 2009-12-31

Total Pages: 390

ISBN-13: 1605669571

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Medical images are at the base of many routine clinical decisions and their influence continues to increase in many fields of medicine. Since the last decade, computers have become an invaluable tool for supporting medical image acquisition, processing, organization and analysis. Biomedical Image Analysis and Machine Learning Technologies: Applications and Techniques provides a panorama of the current boundary between biomedical complexity coming from the medical image context and the multiple techniques which have been used for solving many of these problems. This innovative publication serves as a leading industry reference as well as a source of creative ideas for applications of medical issues.


Digital Geometry

Digital Geometry

Author: Reinhard Klette

Publisher: Morgan Kaufmann

Published: 2004-08-06

Total Pages: 676

ISBN-13: 1558608613

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The first book on digital geometry by the leaders in the field.


Geometric Level Set Methods in Imaging, Vision, and Graphics

Geometric Level Set Methods in Imaging, Vision, and Graphics

Author: Stanley Osher

Publisher: Springer Science & Business Media

Published: 2007-05-08

Total Pages: 523

ISBN-13: 0387218106

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Here is, for the first time, a book that clearly explains and applies new level set methods to problems and applications in computer vision, graphics, and imaging. It is an essential compilation of survey chapters from the leading researchers in the field. The applications of the methods are emphasized.