Conflict and Cooperation in Microbial Societies

Conflict and Cooperation in Microbial Societies

Author: Ana E. Escalante

Publisher: Frontiers Media SA

Published: 2017-04-13

Total Pages: 121

ISBN-13: 2889451437

DOWNLOAD EBOOK

The most evident aspect of biodiversity is the variety of complex forms and behaviors among organisms, both living and extinct. Comparative molecular and physiological studies show that the evolution of complex phenotypic traits involves multiple levels of biological organization (i.e. genes, chromosomes, organelles, cells, individual organisms, species, etc.). Regardless of the specific molecular mechanisms and details, the evolution of different complex biological organizations share a commonality: cooperation and conflict among the parts of the biological unit under study. The potential for conflict among parts is abundant. How then do complex systems persist, given the necessity of cooperative behavior for their maintenance, when the potential for conflict occurs across all levels of biological organization? In this Research Topic and eBook we present ideas and work on the question, how coexistence of biological components at different levels of organization persists in the face of antagonistic, conflicting or even exploitative behavior of the parts? The goal of this topic is in presenting examples of cooperation and conflict at different levels of biological organization to discuss the consequences that this “tension” have had in the diversification and emergence of novel phenotypic traits. Exemplary cases are studies investigating: the evolution of genomes, formation of colonial aggregates of cells, biofilms, the origin and maintenance of multicellular organisms, and the stable coexistence of multispecies consortia producing a cooperative product. Altogether, we hope that the contributions to this Research Topic build towards mechanistic knowledge of the biological phenomenon of coexistence in the face of conflict. We believe that knowledge on the mechanisms of the origin and evolutionary maintenance of cooperation has implications beyond evolutionary biology such as novel approaches in controlling microbial infections in medicine and the modes by studies in synthetic biology are conducted when designing economically important microbial consortia.


The Social Biology of Microbial Communities

The Social Biology of Microbial Communities

Author: Institute of Medicine

Publisher: National Academies Press

Published: 2013-01-10

Total Pages: 633

ISBN-13: 0309264324

DOWNLOAD EBOOK

Beginning with the germ theory of disease in the 19th century and extending through most of the 20th century, microbes were believed to live their lives as solitary, unicellular, disease-causing organisms . This perception stemmed from the focus of most investigators on organisms that could be grown in the laboratory as cellular monocultures, often dispersed in liquid, and under ambient conditions of temperature, lighting, and humidity. Most such inquiries were designed to identify microbial pathogens by satisfying Koch's postulates.3 This pathogen-centric approach to the study of microorganisms produced a metaphorical "war" against these microbial invaders waged with antibiotic therapies, while simultaneously obscuring the dynamic relationships that exist among and between host organisms and their associated microorganisms-only a tiny fraction of which act as pathogens. Despite their obvious importance, very little is actually known about the processes and factors that influence the assembly, function, and stability of microbial communities. Gaining this knowledge will require a seismic shift away from the study of individual microbes in isolation to inquiries into the nature of diverse and often complex microbial communities, the forces that shape them, and their relationships with other communities and organisms, including their multicellular hosts. On March 6 and 7, 2012, the Institute of Medicine's (IOM's) Forum on Microbial Threats hosted a public workshop to explore the emerging science of the "social biology" of microbial communities. Workshop presentations and discussions embraced a wide spectrum of topics, experimental systems, and theoretical perspectives representative of the current, multifaceted exploration of the microbial frontier. Participants discussed ecological, evolutionary, and genetic factors contributing to the assembly, function, and stability of microbial communities; how microbial communities adapt and respond to environmental stimuli; theoretical and experimental approaches to advance this nascent field; and potential applications of knowledge gained from the study of microbial communities for the improvement of human, animal, plant, and ecosystem health and toward a deeper understanding of microbial diversity and evolution. The Social Biology of Microbial Communities: Workshop Summary further explains the happenings of the workshop.


Adaptive Diversification

Adaptive Diversification

Author: Michael Doebeli

Publisher: Princeton University Press

Published: 2011-08-01

Total Pages: 346

ISBN-13: 1400838932

DOWNLOAD EBOOK

Understanding the mechanisms driving biological diversity remains a central problem in ecology and evolutionary biology. Traditional explanations assume that differences in selection pressures lead to different adaptations in geographically separated locations. This book takes a different approach and explores adaptive diversification--diversification rooted in ecological interactions and frequency-dependent selection. In any ecosystem, birth and death rates of individuals are affected by interactions with other individuals. What is an advantageous phenotype therefore depends on the phenotype of other individuals, and it may often be best to be ecologically different from the majority phenotype. Such rare-type advantage is a hallmark of frequency-dependent selection and opens the scope for processes of diversification that require ecological contact rather than geographical isolation. Michael Doebeli investigates adaptive diversification using the mathematical framework of adaptive dynamics. Evolutionary branching is a paradigmatic feature of adaptive dynamics that serves as a basic metaphor for adaptive diversification, and Doebeli explores the scope of evolutionary branching in many different ecological scenarios, including models of coevolution, cooperation, and cultural evolution. He also uses alternative modeling approaches. Stochastic, individual-based models are particularly useful for studying adaptive speciation in sexual populations, and partial differential equation models confirm the pervasiveness of adaptive diversification. Showing that frequency-dependent interactions are an important driver of biological diversity, Adaptive Diversification provides a comprehensive theoretical treatment of adaptive diversification.


Manual of Environmental Microbiology

Manual of Environmental Microbiology

Author: Cindy H. Nakatsu

Publisher: John Wiley & Sons

Published: 2020-08-11

Total Pages: 1042

ISBN-13: 155581882X

DOWNLOAD EBOOK

The single most comprehensive resource for environmental microbiology Environmental microbiology, the study of the roles that microbes play in all planetary environments, is one of the most important areas of scientific research. The Manual of Environmental Microbiology, Fourth Edition, provides comprehensive coverage of this critical and growing field. Thoroughly updated and revised, the Manual is the definitive reference for information on microbes in air, water, and soil and their impact on human health and welfare. Written in accessible, clear prose, the manual covers four broad areas: general methodologies, environmental public health microbiology, microbial ecology, and biodegradation and biotransformation. This wealth of information is divided into 18 sections each containing chapters written by acknowledged topical experts from the international community. Specifically, this new edition of the Manual Contains completely new sections covering microbial risk assessment, quality control, and microbial source tracking Incorporates a summary of the latest methodologies used to study microorganisms in various environments Synthesizes the latest information on the assessment of microbial presence and microbial activity in natural and artificial environments The Manual of Environmental Microbiology is an essential reference for environmental microbiologists, microbial ecologists, and environmental engineers, as well as those interested in human diseases, water and wastewater treatment, and biotechnology.


Microbial Biofilms

Microbial Biofilms

Author: Hilary M. Lappin-Scott

Publisher: Cambridge University Press

Published: 2003-09-18

Total Pages: 332

ISBN-13: 9780521542128

DOWNLOAD EBOOK

Biochemistry and ecology of biofilms from industrial, medical and other viewpoints.


Environmental Microbiology: Fundamentals and Applications

Environmental Microbiology: Fundamentals and Applications

Author: Jean-Claude Bertrand

Publisher: Springer

Published: 2015-01-26

Total Pages: 933

ISBN-13: 940179118X

DOWNLOAD EBOOK

This book is a treatise on microbial ecology that covers traditional and cutting-edge issues in the ecology of microbes in the biosphere. It emphasizes on study tools, microbial taxonomy and the fundamentals of microbial activities and interactions within their communities and environment as well as on the related food web dynamics and biogeochemical cycling. The work exceeds the traditional domain of microbial ecology by revisiting the evolution of cellular prokaryotes and eukaryotes and stressing the general principles of ecology. The overview of the topics, authored by more than 80 specialists, is one of the broadest in the field of environmental microbiology. The overview of the topics, authored by more than 80 specialists, is one of the broadest in the field of environmental microbiology.


Animal Signals

Animal Signals

Author: John Maynard Smith

Publisher: Oxford University Press

Published: 2003-11-06

Total Pages: 184

ISBN-13: 9780198526858

DOWNLOAD EBOOK

The reliability of animal signals is a central problem for evolutionary biologists. This text argues that it is maintained in several ways, relevant in different circumstances, and that biologists must learn to distinguish between them.


An Introduction to Behavioural Ecology

An Introduction to Behavioural Ecology

Author: Nicholas B. Davies

Publisher: John Wiley & Sons

Published: 2009-07-17

Total Pages: 438

ISBN-13: 1444314025

DOWNLOAD EBOOK

The third edition of this successful textbook looks again at the influence of natural selection on behavior - an animal's struggle to survive by exploiting resources, avoiding predators, and maximizing reproductive success. In this edition, new examples are introduced throughout, many illustrated with full color photographs. In addition, important new topics are added including the latest techniques of comparative analysis, the theory and application of DNA fingerprinting techniques, extensive new discussion on brood parasite/host coevolution, the latest ideas on sexual selection in relation to disease resistance, and a new section on the intentionality of communication. Written in the lucid style for which these two authors are renowned, the text is enhanced by boxed sections illustrating important concepts and new marginal notes that guide the reader through the text. This book will be essential reading for students taking courses in behavioral ecology. The leading introductory text from the two most prominent workers in the field. Second colour in the text. New section of four colour plates. Boxed sections to ilustrate difficult and important points. New larger format with marginal notes to guide the reader through the text. Selected further reading at the end of each chapter.


Self-Organization in Complex Ecosystems. (MPB-42)

Self-Organization in Complex Ecosystems. (MPB-42)

Author: Ricard Solé

Publisher: Princeton University Press

Published: 2012-01-06

Total Pages: 384

ISBN-13: 140084293X

DOWNLOAD EBOOK

Can physics be an appropriate framework for the understanding of ecological science? Most ecologists would probably agree that there is little relation between the complexity of natural ecosystems and the simplicity of any example derived from Newtonian physics. Though ecologists have long been interested in concepts originally developed by statistical physicists and later applied to explain everything from why stock markets crash to why rivers develop particular branching patterns, applying such concepts to ecosystems has remained a challenge. Self-Organization in Complex Ecosystems is the first book to clearly synthesize what we have learned about the usefulness of tools from statistical physics in ecology. Ricard Solé and Jordi Bascompte provide a comprehensive introduction to complex systems theory, and ask: do universal laws shape the structure of ecosystems, at least at some scales? They offer the most compelling array of theoretical evidence to date of the potential of nonlinear ecological interactions to generate nonrandom, self-organized patterns at all levels. Tackling classic ecological questions--from population dynamics to biodiversity to macroevolution--the book's novel presentation of theories and data shows the power of statistical physics and complexity in ecology. Self-Organization in Complex Ecosystems will be a staple resource for years to come for ecologists interested in complex systems theory as well as mathematicians and physicists interested in ecology.