Combinatorial Pattern Matching Algorithms in Computational Biology Using Perl and R
Combinatorial Pattern Matching Algorithms in Computational Biology Using Perl and R

Author: Gabriel Valiente

Publisher: CRC Press

Published: 2009-04-08

Total Pages: 370

ISBN-13: 1420069748

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Emphasizing the search for patterns within and between biological sequences, trees, and graphs, Combinatorial Pattern Matching Algorithms in Computational Biology Using Perl and R shows how combinatorial pattern matching algorithms can solve computational biology problems that arise in the analysis of genomic, transcriptomic, proteomic, metabolomic

Combinatorial Pattern Matching
Combinatorial Pattern Matching

Author: Martin Farach-Colton

Publisher: Springer Science & Business Media

Published: 1998-07-08

Total Pages: 268

ISBN-13: 9783540647393

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This is a fair overview of the basic problems in Solar Physics. The authors address not only the physics that is well understood but also discuss many open questions. The lecturers' involvement in the SOHO mission guarantees a modern and up-to-date analysis of observational data and makes this volume an extremely valuable source for further research.

Combinatorial Pattern Matching
Combinatorial Pattern Matching

Author: Moshe Lewenstein

Publisher: Springer Science & Business Media

Published: 2006-06-26

Total Pages: 425

ISBN-13: 3540354557

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This book constitutes the refereed proceedings of the 17th Annual Symposium on Combinatorial Pattern Matching, CPM 2006, held in Barcelona, Spain in July 2006. The 33 revised full papers presented together with 3 invited talks were carefully reviewed and selected from 88 submissions. The papers are organized in topical sections on data structures, indexing data structures, probabilistic and algebraic techniques, applications in molecular biology, string matching, data compression, and dynamic programming.

Combinatorial Pattern Matching
Combinatorial Pattern Matching

Author: Raffaele Giancarlo

Publisher: Springer

Published: 2011-06-27

Total Pages: 493

ISBN-13: 3642214584

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This book constitutes the refereed proceedings of the 22nd Annual Symposium on Combinatorial Pattern Matching, CPM 2011, held in Palermi, Italy, in June 2011. The 36 revised full papers presented together with 3 invited talks were carefully reviewed and selected from 70 submissions. The papers address issues of searching and matching strings and more complicated patterns such as trees, regular expressions, graphs, point sets, and arrays. The goal is to derive non-trivial combinatorial properties of such structures and to exploit these properties in order to either achieve superior performance for the corresponding computational problems or pinpoint conditions under which searches cannot be performed efficiently. The meeting also deals with problems in computational biology, data compression and data mining, coding, information retrieval, natural language processing and pattern recognition.

Combinatorial Pattern Matching
Combinatorial Pattern Matching

Author: Suleyman C. Sahinalp

Publisher: Springer Science & Business Media

Published: 2004-06-22

Total Pages: 496

ISBN-13: 354022341X

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This book constitutes the refereed proceedings of the 15th Annual Symposium on Combinatorial Pattern Matching, CPM 2004, held in Istanbul, Turkey in July 2004. The 36 revised full papers presented were carefully reviewed and selected from 79 submissions. The papers are devoted to current theoretical and computational aspects of searching and matching of strings and more complicate patterns, such as trees, regular expressions, graphs, point sets, and arrays. Among the application fields addressed are computational biology, bioinformatics, genomics, proteinomics, the web, data compression, coding, multimedia, information retrieval, data analysis, pattern recognition, and computer vision.

Combinatorial Pattern Matching
Combinatorial Pattern Matching

Author: Alberto Apostolico

Publisher: Springer

Published: 2005-05-13

Total Pages: 453

ISBN-13: 3540315624

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This book constitutes the refereed proceedings of the 16th Annual Symposium on Combinatorial Pattern Matching, CPM 2005, held in Jeju island, Korea on June 19-22, 2005. The 37 revised full papers presented were carefully reviewed and selected from 129 submissions. They constitute original research contributions in combinatorial pattern matching and its applications. Among the application fields addressed are computational biology, bioinformatics, genomics, proteinomics, data compression, Sequence Analysis and Graphs, information retrieval, data analysis, and pattern recognition.

Combinatorial Pattern Matching
Combinatorial Pattern Matching

Author: Amihood Amir

Publisher: Springer Science & Business Media

Published: 2010-06

Total Pages: 374

ISBN-13: 3642135080

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The LNCS series reports state-of-the-art results in computer science research, development, and education, at a high level and in both printed and electronic form. Enjoying tight cooperation with the R&D community, with numerous individuals, as well as with prestigious organizations and societies, LNCS has grown into the most comprehensive computer science research forum available. The scope of LNCS, including its subseries LNAI and LNBI, spans the whole range of computer science and information technology including interdisciplinary topics in a variety of application fields. The type of material published traditionally includes -proceedings (published in time for the respective conference) -post-proceedings (consisting of thoroughly revised final full papers) -research monographs (which may be based on outstanding PhD work, research projects, technical reports, etc.) More recently, several color-cover sublines have been added featuring, beyond a collection of papers, various added-value components; these sublines include -tutorials (textbook-like monographs or collections of lectures given at advanced courses) -state-of-the-art surveys (offering complete and mediated coverage of a topic) -hot topics (introducing emergent topics to the broader community)

Combinatorial Pattern Matching
Combinatorial Pattern Matching

Author: Paolo Ferragina

Publisher: Springer

Published: 2008-06-08

Total Pages: 327

ISBN-13: 3540690689

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The papers contained in this volume were presented at the 19th Annual S- posium on Combinatorial Pattern Matching (CPM 2008) held at the University of Pisa, Italy, June 18–20, 2008. All the papers presented at the conference are originalresearchcontributions on computational pattern matching and analysis. They were selected from 78 submissions. Each submission was reviewed by at least three reviewers. The committee decided to accept 25 papers. The programme also includes three invited talks by Daniel M. Gus?eld from the University of California, Davis, USA, J. Ian Munro from the University of Waterloo, Canada, and Prabhakar Raghavan from Yahoo! Research, USA. The objective of the annual CPM meetings is to provide an international forum for research in combinatorial pattern matching and related applications. It addresses issues of searching and matching strings and more complicated p- terns such as trees, regular expressions, graphs, point sets, and arrays. The goal is to derive non-trivialcombinatorialproperties of suchstructures and to exploit these properties in order to either achieve superior performance for the cor- sponding computational problems or pinpoint conditions under which searches cannotbeperformede?ciently. Themeeting also dealswith problems incom- tational biology, data compression, data mining, coding, information retrieval, natural language processing and pattern recognition.

Combinatorial Pattern Matching
Combinatorial Pattern Matching

Author: Bin Ma

Publisher: Springer Science & Business Media

Published: 2007-06-22

Total Pages: 377

ISBN-13: 3540734368

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This volume features select refereed proceedings from the 18th Annual Symposium on Combinatorial Pattern Matching. Collectively, the papers provide great insights into the most recent advances in combinatorial pattern matching. They are organized into topical sections covering algorithmic techniques, approximate pattern matching, data compression, computational biology, pattern analysis, suffix arrays and trees, and algorithmic techniques.

Combinatorial Pattern Matching
Combinatorial Pattern Matching

Author: Ricardo Baeza-Yates

Publisher: Springer

Published: 2007-03-06

Total Pages: 412

ISBN-13: 3540448888

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The refereed proceedings of the 14th Annual Symposium on Combinatorial Pattern Matching, CPM 2003, held in Morelia, Michoacán, Mexico in June 2003. The 28 revised full papers presented were carefully reviewed and selected from 57 submissions. The papers are devoted to current theoretical and computational aspects of searching and matching strings and more complicated patterns, such as trees, regular expressions, graphs, point sets, and arrays. Among the application fields addressed are computational biology, bioinformatics, genomics, the Web, data compression, coding, multimedia, information retrieval, pattern recognition, and computer vision.