Unsupervised Learning Approaches for Dimensionality Reduction and Data Visualization
Unsupervised Learning Approaches for Dimensionality Reduction and Data Visualization

Author: B.K. Tripathy

Publisher: CRC Press

Published: 2021-09-01

Total Pages: 174

ISBN-13: 1000438317

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Unsupervised Learning Approaches for Dimensionality Reduction and Data Visualization describes such algorithms as Locally Linear Embedding (LLE), Laplacian Eigenmaps, Isomap, Semidefinite Embedding, and t-SNE to resolve the problem of dimensionality reduction in the case of non-linear relationships within the data. Underlying mathematical concepts, derivations, and proofs with logical explanations for these algorithms are discussed, including strengths and limitations. The book highlights important use cases of these algorithms and provides examples along with visualizations. Comparative study of the algorithms is presented to give a clear idea on selecting the best suitable algorithm for a given dataset for efficient dimensionality reduction and data visualization. FEATURES Demonstrates how unsupervised learning approaches can be used for dimensionality reduction Neatly explains algorithms with a focus on the fundamentals and underlying mathematical concepts Describes the comparative study of the algorithms and discusses when and where each algorithm is best suitable for use Provides use cases, illustrative examples, and visualizations of each algorithm Helps visualize and create compact representations of high dimensional and intricate data for various real-world applications and data analysis This book is aimed at professionals, graduate students, and researchers in Computer Science and Engineering, Data Science, Machine Learning, Computer Vision, Data Mining, Deep Learning, Sensor Data Filtering, Feature Extraction for Control Systems, and Medical Instruments Input Extraction.

Computational Learning Approaches to Data Analytics in Biomedical Applications
Computational Learning Approaches to Data Analytics in Biomedical Applications

Author: Khalid Al-Jabery

Publisher: Academic Press

Published: 2019-11-20

Total Pages: 312

ISBN-13: 0128144831

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Computational Learning Approaches to Data Analytics in Biomedical Applications provides a unified framework for biomedical data analysis using varied machine learning and statistical techniques. It presents insights on biomedical data processing, innovative clustering algorithms and techniques, and connections between statistical analysis and clustering. The book introduces and discusses the major problems relating to data analytics, provides a review of influential and state-of-the-art learning algorithms for biomedical applications, reviews cluster validity indices and how to select the appropriate index, and includes an overview of statistical methods that can be applied to increase confidence in the clustering framework and analysis of the results obtained. - Includes an overview of data analytics in biomedical applications and current challenges - Updates on the latest research in supervised learning algorithms and applications, clustering algorithms and cluster validation indices - Provides complete coverage of computational and statistical analysis tools for biomedical data analysis - Presents hands-on training on the use of Python libraries, MATLAB® tools, WEKA, SAP-HANA and R/Bioconductor

Computational Genomics with R
Computational Genomics with R

Author: Altuna Akalin

Publisher: CRC Press

Published: 2020-12-16

Total Pages: 463

ISBN-13: 1498781861

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Computational Genomics with R provides a starting point for beginners in genomic data analysis and also guides more advanced practitioners to sophisticated data analysis techniques in genomics. The book covers topics from R programming, to machine learning and statistics, to the latest genomic data analysis techniques. The text provides accessible information and explanations, always with the genomics context in the background. This also contains practical and well-documented examples in R so readers can analyze their data by simply reusing the code presented. As the field of computational genomics is interdisciplinary, it requires different starting points for people with different backgrounds. For example, a biologist might skip sections on basic genome biology and start with R programming, whereas a computer scientist might want to start with genome biology. After reading: You will have the basics of R and be able to dive right into specialized uses of R for computational genomics such as using Bioconductor packages. You will be familiar with statistics, supervised and unsupervised learning techniques that are important in data modeling, and exploratory analysis of high-dimensional data. You will understand genomic intervals and operations on them that are used for tasks such as aligned read counting and genomic feature annotation. You will know the basics of processing and quality checking high-throughput sequencing data. You will be able to do sequence analysis, such as calculating GC content for parts of a genome or finding transcription factor binding sites. You will know about visualization techniques used in genomics, such as heatmaps, meta-gene plots, and genomic track visualization. You will be familiar with analysis of different high-throughput sequencing data sets, such as RNA-seq, ChIP-seq, and BS-seq. You will know basic techniques for integrating and interpreting multi-omics datasets. Altuna Akalin is a group leader and head of the Bioinformatics and Omics Data Science Platform at the Berlin Institute of Medical Systems Biology, Max Delbrück Center, Berlin. He has been developing computational methods for analyzing and integrating large-scale genomics data sets since 2002. He has published an extensive body of work in this area. The framework for this book grew out of the yearly computational genomics courses he has been organizing and teaching since 2015.

DATA VISUALIZATION AND INTERPRETATION USING MACHINE LEARNING
DATA VISUALIZATION AND INTERPRETATION USING MACHINE LEARNING

Author: Anjan Kumar Reddy Ayyadapu

Publisher: Xoffencerpublication

Published: 2024-04-18

Total Pages: 205

ISBN-13: 8119534646

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Among the various definitions of artificial intelligence, "machine-made intelligence" and "an artificial embodiment of some or all of the intellectual abilities possessed by humans" are two examples of what is meant by the term. Among the different explanations of artificial intelligence, the following are some essential points: "machines endowed with human-level intellect that can comprehend human-level reasoning, conduct, and thought processes." It is commonly believed that the ability to "apply prior knowledge and experience to achieve challenging new tasks" is what distinguishes a person as intelligent. One may make the case that this is a reference to the inherent wisdom that people possess in the end. In addition to being connected to the capacity for learning, this ability can be leveraged to respond in a flexible manner to a variety of situations and obstacles. A person's learning ability can be defined as their capability to learn new things in a short amount of time and in a comprehensive manner, or to acquire the same information in a more sophisticated manner. There is a correlation between prior knowledge and academic achievement, intellectual reasoning, and behavior; hence, intelligence may be molded via the process of being exposed to new material and training. It is for this reason that "the ability to solve problems" is frequently considered to be the starting point and ultimate definition of intelligence. When it comes to addressing a wide variety of problems, we require individuals who possess a high level of intelligence. Consider the game of chess as an illustration. You'll need to draw on knowledge from a broad variety of sources, such as books, internet resources, and other players, in order to make accurate guesses and put them into action. In order to carry out these acts, a high level of cognitive capacity is required, and it is via intelligencebased learning that new ways of thinking are developed. "Thought" is defined as "consciousness" in scientific contexts, which in turn characterize it as "experience" of an object in its whole.

Data Analytics in Bioinformatics
Data Analytics in Bioinformatics

Author: Rabinarayan Satpathy

Publisher: John Wiley & Sons

Published: 2021-01-20

Total Pages: 433

ISBN-13: 111978560X

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Machine learning techniques are increasingly being used to address problems in computational biology and bioinformatics. Novel machine learning computational techniques to analyze high throughput data in the form of sequences, gene and protein expressions, pathways, and images are becoming vital for understanding diseases and future drug discovery. Machine learning techniques such as Markov models, support vector machines, neural networks, and graphical models have been successful in analyzing life science data because of their capabilities in handling randomness and uncertainty of data noise and in generalization. Machine Learning in Bioinformatics compiles recent approaches in machine learning methods and their applications in addressing contemporary problems in bioinformatics approximating classification and prediction of disease, feature selection, dimensionality reduction, gene selection and classification of microarray data and many more.

Sufficient Dimension Reduction
Sufficient Dimension Reduction

Author: Bing Li

Publisher: CRC Press

Published: 2018-04-27

Total Pages: 362

ISBN-13: 1351645730

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Sufficient dimension reduction is a rapidly developing research field that has wide applications in regression diagnostics, data visualization, machine learning, genomics, image processing, pattern recognition, and medicine, because they are fields that produce large datasets with a large number of variables. Sufficient Dimension Reduction: Methods and Applications with R introduces the basic theories and the main methodologies, provides practical and easy-to-use algorithms and computer codes to implement these methodologies, and surveys the recent advances at the frontiers of this field. Features Provides comprehensive coverage of this emerging research field. Synthesizes a wide variety of dimension reduction methods under a few unifying principles such as projection in Hilbert spaces, kernel mapping, and von Mises expansion. Reflects most recent advances such as nonlinear sufficient dimension reduction, dimension folding for tensorial data, as well as sufficient dimension reduction for functional data. Includes a set of computer codes written in R that are easily implemented by the readers. Uses real data sets available online to illustrate the usage and power of the described methods. Sufficient dimension reduction has undergone momentous development in recent years, partly due to the increased demands for techniques to process high-dimensional data, a hallmark of our age of Big Data. This book will serve as the perfect entry into the field for the beginning researchers or a handy reference for the advanced ones. The author Bing Li obtained his Ph.D. from the University of Chicago. He is currently a Professor of Statistics at the Pennsylvania State University. His research interests cover sufficient dimension reduction, statistical graphical models, functional data analysis, machine learning, estimating equations and quasilikelihood, and robust statistics. He is a fellow of the Institute of Mathematical Statistics and the American Statistical Association. He is an Associate Editor for The Annals of Statistics and the Journal of the American Statistical Association.

50th Anniversary of the Metaphorical Butterfly Effect since Lorenz (1972)
50th Anniversary of the Metaphorical Butterfly Effect since Lorenz (1972)

Author: Bo-Wen Shen

Publisher: MDPI AG

Published: 2023-10-11

Total Pages: 338

ISBN-13: 3036589104

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Celebrate the 50th anniversary of the metaphorical butterfly effect, born from Edward Lorenz's 1963 work on initial condition sensitivity. In 1972, it became a metaphor for illustrating how minor changes could yield an organized system. Lorenz Models: Chaos & Regime Changes Explore Lorenz models' 1960-2008 evolution, chaos theory, and attractors. Unraveling High-dimensional Instability Challenge norms in "Butterfly Effect without Chaos?" as non-chaotic elements contribute uniquely. Modeling Atmospheric Dynamics Delve into atmospheric dynamics via "Storm Sensitivity Study." Navigating Data Assimilation Explore data assimilation's dance in chaotic and nonchaotic settings via the observability Gramian. Chaos, Instability, Sensitivities Explore chaos, instability, and sensitivities with Lorenz 1963 & 1969 models. Unraveling Tropical Mysteries Investigate tropical atmospheric instability, uncovering oscillation origins and cloud-radiation interactions. Chaos and Order Enter atmospheric regimes, exploring attractor coexistence and predictability. The Art of Prediction Peer into predictability realms, tracing the "butterfly effect's" impact on predictions. Navigating Typhoons Journey through typhoons, exploring rainfall and typhoon trajectory prediction. Analyzing Sea Surface Temperature Examine nonlinear analysis for classification. Computational Fluid Dynamics Immerse in geophysical fluid dynamics progress, simulating atmospheric phenomena.

Intelligent Computing
Intelligent Computing

Author: Kohei Arai

Publisher: Springer Nature

Published: 2022-07-06

Total Pages: 941

ISBN-13: 3031104641

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The book, “Intelligent Computing - Proceedings of the 2022 Computing Conference”, is a comprehensive collection of chapters focusing on the core areas of computing and their further applications in the real world. Each chapter is a paper presented at the Computing Conference 2022 held on July 14–15, 2022. Computing 2022 attracted a total of 498 submissions which underwent a double-blind peer-review process. Of those 498 submissions, 179 submissions have been selected to be included in this book. The goal of this conference is to give a platform to researchers with fundamental contributions and to be a premier venue for academic and industry practitioners to share new ideas and development experiences. We hope that readers find this book interesting and valuable as it provides the state-of-the-art intelligent methods and techniques for solving real-world problems. We also expect that the conference and its publications will be a trigger for further related research and technology improvements in this important subject.

Machine Learning-Based Modelling in Atomic Layer Deposition Processes
Machine Learning-Based Modelling in Atomic Layer Deposition Processes

Author: Oluwatobi Adeleke

Publisher: CRC Press

Published: 2023-12-15

Total Pages: 353

ISBN-13: 1003803334

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While thin film technology has benefited greatly from artificial intelligence (AI) and machine learning (ML) techniques, there is still much to be learned from a full-scale exploration of these technologies in atomic layer deposition (ALD). This book provides in-depth information regarding the application of ML-based modeling techniques in thin film technology as a standalone approach and integrated with the classical simulation and modeling methods. It is the first of its kind to present detailed information regarding approaches in ML-based modeling, optimization, and prediction of the behaviors and characteristics of ALD for improved process quality control and discovery of new materials. As such, this book fills significant knowledge gaps in the existing resources as it provides extensive information on ML and its applications in film thin technology. Offers an in-depth overview of the fundamentals of thin film technology, state-of-the-art computational simulation approaches in ALD, ML techniques, algorithms, applications, and challenges. Establishes the need for and significance of ML applications in ALD while introducing integration approaches for ML techniques with computation simulation approaches. Explores the application of key techniques in ML, such as predictive analysis, classification techniques, feature engineering, image processing capability, and microstructural analysis of deep learning algorithms and generative model benefits in ALD. Helps readers gain a holistic understanding of the exciting applications of ML-based solutions to ALD problems and apply them to real-world issues. Aimed at materials scientists and engineers, this book fills significant knowledge gaps in existing resources as it provides extensive information on ML and its applications in film thin technology. It also opens space for future intensive research and intriguing opportunities for ML-enhanced ALD processes, which scale from academic to industrial applications. . .

Multi-omic Data Integration in Oncology
Multi-omic Data Integration in Oncology

Author: Chiara Romualdi

Publisher: Frontiers Media SA

Published: 2020-12-03

Total Pages: 187

ISBN-13: 2889661512

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This eBook is a collection of articles from a Frontiers Research Topic. Frontiers Research Topics are very popular trademarks of the Frontiers Journals Series: they are collections of at least ten articles, all centered on a particular subject. With their unique mix of varied contributions from Original Research to Review Articles, Frontiers Research Topics unify the most influential researchers, the latest key findings and historical advances in a hot research area! Find out more on how to host your own Frontiers Research Topic or contribute to one as an author by contacting the Frontiers Editorial Office: frontiersin.org/about/contact.