Understanding Modulations to Hydrophobicity by Spatially Heterogeneous Interfaces

Understanding Modulations to Hydrophobicity by Spatially Heterogeneous Interfaces

Author: Bradley Dallin

Publisher:

Published: 2021

Total Pages: 0

ISBN-13:

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Understanding how interfaces interact with interfacial water molecules is vital to design novel bio- and nanomaterials that can rationally tune hydrophobic interactions (i.e., water-mediated interactions that drive the association of nonpolar materials in an aqueous environment). Materials with fine-tuned hydrophobicity would be of great importance in various biological (e.g., lipid membrane self-assembly) and industrial applications (e.g., separations). However, accurately predicting hydrophobic interactions at the nanoscale poses a significant challenge due to collective interactions between interfacial water molecules and the specific physical or chemical properties on the surface. Enormous research effort using experiments, simulations, and theory has been applied to relate surface properties, interfacial water structure, and hydrophobicity. The general goal of this dissertation is to apply simulation experiments and data-centric analysis to build upon the existing literature to fundamentally understand how spatially varying physical and chemical surface properties influence hydrophobic interactions. In Chapters 2 and 3, we examine how spatially varying physical properties influence hydrophobic interactions. We developed an experimentally validated simulation methodology to directly measure hydrophobic interactions between two uniformly nonpolar, planar self-assembled monolayers (SAMs). In addition, we quantified interfacial water structure by measuring a variety of water order parameters to determine how physical properties perturb the interfacial water hydrogen bond network. Our observations showed that increased SAM order correlated with decreased interfacial water structure. These observations predicted differences in the solvation entropy of the SAM-water interface, which we confirmed using simulation and experimental measurements of hydrophobic force as a function of temperature. In Chapter 4, we explore how specific end group chemistry and surface patterns influence hydrophobicity. We deployed a more efficient method to measure relative differences in SAM hydrophobicity to evaluate many more chemistries and patterns. We quantified interfacial water structure for each of the SAMs and trained a data-centric regression model to predict SAM hydrophobicity. Strikingly, this regression model required only five water structural features to accurately predict hydrophobicity. We further examined these features to understand fundamentally how chemistry and pattern tune interfacial water structure to alter hydrophobicity. In Chapter 5, we apply the insights gained from Chapter 3 which found that changes in the local water structural properties on the surface related to macroscopic differences in hydrophobicity. Using 2D and 3D data representations of the spatially varying interfacial water properties, we developed a machine learning model that uses convolutional neural networks to rapidly predict SAM hydrophobicity. This model provides a valuable tool to virtually screen many different SAM surface properties. In Chapter 6, we combine our newly established understanding of how physical properties (Chapters 2 and 3) and chemical properties (Chapter 4) impact hydrophobicity to predict howsurface properties of a SAM-protected gold nanoparticle (GNP) alter hydrophobicity. We find that physical properties, such as GNP curvature and ligand backbone, affect hydrophobicity by altering the GNP surface topology. We also find that changing the end group chemistry has a pronounced effect on GNP hydrophobicity. We use these insights to map hydrophobicity on GNPs which serve as an accurate prediction of small molecule binding to the GNP surface. The new insights gained in these studies about the relationship between surface properties, interfacial water structure, and hydrophobicity provide a strong basis of understanding for how physically and chemically heterogeneous materials modulate hydrophobic interactions. This new understanding could be directly applied as a framework for guided bio- and nanomaterials design in the many applications involving water-mediated interactions.


Chemistry of the Upper and Lower Atmosphere

Chemistry of the Upper and Lower Atmosphere

Author: Barbara J. Finlayson-Pitts

Publisher: Elsevier

Published: 1999-11-17

Total Pages: 993

ISBN-13: 0080529070

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Here is the most comprehensive and up-to-date treatment of one of the hottest areas of chemical research. The treatment of fundamental kinetics and photochemistry will be highly useful to chemistry students and their instructors at the graduate level, as well as postdoctoral fellows entering this new, exciting, and well-funded field with a Ph.D. in a related discipline (e.g., analytical, organic, or physical chemistry, chemical physics, etc.). Chemistry of the Upper and Lower Atmosphere provides postgraduate researchers and teachers with a uniquely detailed, comprehensive, and authoritative resource. The text bridges the "gap" between the fundamental chemistry of the earth's atmosphere and "real world" examples of its application to the development of sound scientific risk assessments and associated risk management control strategies for both tropospheric and stratospheric pollutants. Serves as a graduate textbook and "must have" reference for all atmospheric scientists Provides more than 5000 references to the literature through the end of 1998 Presents tables of new actinic flux data for the troposphere and stratospher (0-40km) Summarizes kinetic and photochemical date for the troposphere and stratosphere Features problems at the end of most chapters to enhance the book's use in teaching Includes applications of the OZIPR box model with comprehensive chemistry for student use


Chemical Electrostatics

Chemical Electrostatics

Author: Fernando Galembeck

Publisher: Springer

Published: 2017-03-09

Total Pages: 237

ISBN-13: 3319523740

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This book provides new clues for understanding electrostatic charging in solids and liquids, resulting from the surge of research in this active area of science that is taking place since the 1990's but is still largely unknown to most researchers, lecturers and engineers. Written by a leading researcher in this field, this book describes the formation and properties of the Earth capacitor, the production of environmental electricity and its effect on natural and anthropic systems and examines many situations in which water may play a decisive role in electrostatic behavior. The authors present an informed critique of the long-held assumption that pure substances should be electroneutral. In this regard, the authors show that charge partition and accumulation is expected considering the electrochemical potential under non-zero electrostatic potential, which prevails at Earth surface. This book provides conceptual tools to guide the reader through the complexities and consequences of electrostatic phenomena while covering exciting current topics such as energy scavenging from the environment, electrostatic based green production, energy-saving processes, electrochemistry at the solid-gas interface, therapeutic electrostatic treatments, applications in sanitation and pest control and control of atmospheric electricity and its use in climate engineering.


Nanotechnologies in Preventive and Regenerative Medicine

Nanotechnologies in Preventive and Regenerative Medicine

Author: Vuk Uskokovic

Publisher: Elsevier

Published: 2017-10-30

Total Pages: 618

ISBN-13: 0323480640

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Nanotechnologies in Preventative and Regenerative Medicine demonstrates how control at the nanoscale can help achieve earlier diagnoses and create more effective treatments. Chapters take a logical approach, arranging materials by their area of application. Biomaterials are, by convention, divided according to the area of their application, with each chapter outlining current challenges before discussing how nanotechnology and nanomaterials can help solve these challenges This applications-orientated book is a valuable resource for researchers in biomedical science who want to gain a greater understanding on how nanotechnology can help create more effective vaccines and treatments, and to nanomaterials researchers seeking to gain a greater understanding of how these materials are applied in medicine. Demonstrates how nanotechnology can help achieve more successful diagnoses at an earlier stage Explains how nanomaterials can be manipulated to create more effective drug treatments Offers suggestions on how the use of nanotechnology might have future applications to create even more effective treatments


Preparative Chromatography for Separation of Proteins

Preparative Chromatography for Separation of Proteins

Author: Arne Staby

Publisher: John Wiley & Sons

Published: 2017-02-02

Total Pages: 608

ISBN-13: 1119031176

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Preparative Chromatography for Separation of Proteins addresses a wide range of modeling, techniques, strategies, and case studies of industrial separation of proteins and peptides. • Covers broad aspects of preparative chromatography with a unique combination of academic and industrial perspectives • Presents Combines modeling with compliantce useing of Quality-by-Design (QbD) approaches including modeling • Features a variety of chromatographic case studies not readily accessible to the general public • Represents an essential reference resource for academic, industrial, and pharmaceutical researchers


Water in Biological and Chemical Processes

Water in Biological and Chemical Processes

Author: Biman Bagchi

Publisher: Cambridge University Press

Published: 2013-11-14

Total Pages: 383

ISBN-13: 1107037298

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A unified overview of the dynamical properties of water and its unique and diverse role in biological and chemical processes.


The Giant Vesicle Book

The Giant Vesicle Book

Author: Rumiana Dimova

Publisher: CRC Press

Published: 2019-11-19

Total Pages: 1144

ISBN-13: 1351648551

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Giant vesicles are widely used as a model membrane system, both for basic biological systems and for their promising applications in the development of smart materials and cell mimetics, as well as in driving new technologies in synthetic biology and for the cosmetics and pharmaceutical industry. The reader is guided to use giant vesicles, from the formation of simple membrane platforms to advanced membrane and cell system models. It also includes fundamentals for understanding lipid or polymer membrane structure, properties and behavior. Every chapter includes ideas for further applications and discussions on the implications of the observed phenomena towards understanding membrane-related processes. The Giant Vesicle Book is meant to be a road companion, a trusted guide for those making their first steps in this field as well as a source of information required by experts. Key Features • A complete summary of the field, covering fundamental concepts, practical methods, core theory, and the most promising applications • A start-up package of theoretical and experimental information for newcomers in the field • Extensive protocols for establishing the required preparations and assays • Tips and instructions for carefully performing and interpreting measurements with giant vesicles or for observing them, including pitfalls • Approaches developed for investigating giant vesicles as well as brief overviews of previous studies implementing the described techniques • Handy tables with data and structures for ready reference


A Research Agenda for Transforming Separation Science

A Research Agenda for Transforming Separation Science

Author: National Academies of Sciences, Engineering, and Medicine

Publisher: National Academies Press

Published: 2019-10-30

Total Pages: 115

ISBN-13: 0309491703

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Separation science plays a critical role in maintaining our standard of living and quality of life. Many industrial processes and general necessities such as chemicals, medicines, clean water, safe food, and energy sources rely on chemical separations. However, the process of chemical separations is often overlooked during product development and this has led to inefficiency, unnecessary waste, and lack of consensus among chemists and engineers. A reevaluation of system design, establishment of standards, and an increased focus on the advancement of separation science are imperative in supporting increased efficiency, continued U.S. manufacturing competitiveness, and public welfare. A Research Agenda for Transforming Separation Science explores developments in the industry since the 1987 National Academies report, Separation and Purification: Critical Needs and Opportunities. Many needs stated in the original report remain today, in addition to a variety of new challenges due to improved detection limits, advances in medicine, and a recent emphasis on sustainability and environmental stewardship. This report examines emerging chemical separation technologies, relevant developments in intersecting disciplines, and gaps in existing research, and provides recommendations for the application of improved separation science technologies and processes. This research serves as a foundation for transforming separation science, which could reduce global energy use, improve human and environmental health, and advance more efficient practices in various industries.


Biofilms in Medicine, Industry and Environmental Biotechnology

Biofilms in Medicine, Industry and Environmental Biotechnology

Author: Piet Lens

Publisher: IWA Publishing

Published: 2003-04-30

Total Pages: 634

ISBN-13: 1843390191

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Biofilms are of great practical importance for beneficial technologies such as water and wastewater treatment and bioremediation of groundwater and soil. In other settings biofilms cause severe problems, for example in 65% of bacterial infections currently treated by clinicians (particularly those associated with prosthetics and implants), accelerated corrosion in industrial systems, oil souring and biofouling. Until recently, the structure and function of biofilms could only be inferred from gross measures of biomass and metabolic activity. This limitation meant that investigators involved in biofilm research and application had only a crude understanding of the microbial ecology, physical structure and chemical characteristics of biofilms. Consequently, opportunities for the exploitation and control of biofilms were very limited. The past decade has witnessed the development of several new techniques to elucidate the structure and function of biofilms. Examples include: the use of molecular probes that identify different microbes in complex communities as well as their metabolic functions; the use of microsensors that show concentration gradients of key nutrients and chemicals; the use of confocal laser scanning microscopy to describe the physical structure of biofilms and the development of a new generation of mathematical models that allow for the prediction of biofilm structure and function. However, much progress remains to be made in efforts to understand, control and exploit biofilms. This timely book will introduce its readers to the structure and function of biofilms at a fundamental level as determined during the past decade of research, including: Extracellular polymers as the biofilm matrix; Biofilm phenotype (differential gene expression, interspecies signalling); Biofilm ecology; Biofilm monitoring; Resistance of biofilms to antimicrobial agents and Biofilm abatement. Biofilms in Medicine, Industry and Environmental Technology offers a holistic and multi-disciplinary description of the topic, including biofilm formation and composition, but also biofilm monitoring, disinfection and control. All these aspects are presented from three points of views: medical, industrial and environmental biotechnological in a compact, easy to read format.


Handbook of Surface Plasmon Resonance

Handbook of Surface Plasmon Resonance

Author: Richard B. M. Schasfoort

Publisher: Royal Society of Chemistry

Published: 2017-05-30

Total Pages: 555

ISBN-13: 1782627308

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Surface plasmon resonance (SPR) plays a dominant role in real-time interaction sensing of biomolecular binding events, this book provides a total system description including optics, fluidics and sensor surfaces for a wide researcher audience.