Regulation of Biofilm Formation in Two Gamma-proteobacteria

Regulation of Biofilm Formation in Two Gamma-proteobacteria

Author: Jana Mueller

Publisher: Stanford University

Published: 2010

Total Pages: 166

ISBN-13:

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S. oneidensis MR-1 is a dissimilatory metal-reducing bacterium. Under anaerobic conditions S. oneidensis MR-1 attaches to insoluble minerals such as Fe(III) and Mn(IV) oxides and can use these as alternative electron acceptors. Biofilms of S. oneidensis MR- 1 were previously found to be dependent on the mxd gene cluster (mxdABCD). This study identified environmental and genetic factors regulating mxd -dependent and -independent biofilm formation in S. oneidensis MR-1 and a putative function for mxdB in LPS biosynthesis. Physiological experiments determined electron donor starvation as a factor responsible for mxd induction. Tn5 mutagenesis identified the two-component signaling system (TCS) ArcS/ArcA and a putative TCS BarA/UvrY as regulators of mxd expression. ccmC, important for cytochrome c maturation, was found to be involved in biofilm formation in S. oneidensis MR-1. Microarray analysis identified ccmC to play a role in aspects of anaerobic and fermentative metabolism in S. oneidensis MR-1. In conclusion, these data indicate a potential connection between energy metabolism of the cell, mxd and biofilm formation in S. oneidenis MR-1. The natural life cycle of the phylogenetically closest relative V. cholerae A1552 involves the transitioning of cells between different environmental surfaces such as the chitinous shell of Crustaceae and the epithelial layer of the human intestine and vice versa. Biofilms of V. cholerae A1552 vpsA and luxO mutants grown under hydrodynamic flow conditions were found to form pronounced, three-dimensional biofilms that resemble all aspects of wild type biofilms. By genetic experiments, it was shown that in hydrodynamically-grown biofilms this independence of vpsA is due to the expression of rpoS, which is a negative regulator of vpsA expression. Biofilms also underwent substantial metabolically controlled dissolution after 96 h that could be induced by a simple stop of medium flow across the biofilm. These studies indicate that metabolic conditions control the reversible attachment of cells to the biofilm matrix and are key in regulating biofilm cell physiology via rpoS. Furthermore, these results redefine the roles of vps and quorum-sensing in V. cholerae A1552 biofilms.


Regulation of Bacterial Virulence

Regulation of Bacterial Virulence

Author: Michael L. Vasil

Publisher: American Society for Microbiology Press

Published: 2012-12-05

Total Pages: 1189

ISBN-13: 1555816762

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A comprehensive compendium of scholarly contributions relating to bacterial virulence gene regulation. • Provides insights into global control and the switch between distinct infectious states (e.g., acute vs. chronic). • Considers key issues about the mechanisms of gene regulation relating to: surface factors, exported toxins and export mechanisms. • Reflects on how the regulation of intracellular lifestyles and the response to stress can ultimately have an impact on the outcome of an infection. • Highlights and examines some emerging regulatory mechanisms of special significance. • Serves as an ideal compendium of valuable topics for students, researchers and faculty with interests in how the mechanisms of gene regulation ultimately affect the outcome of an array of bacterial infectious diseases.


Current Topics in Microbiology and Immunology / Ergebnisse der Mikrobiologie und Immunitätsforschung

Current Topics in Microbiology and Immunology / Ergebnisse der Mikrobiologie und Immunitätsforschung

Author: W. Arber

Publisher: Springer Science & Business Media

Published: 2013-03-08

Total Pages: 254

ISBN-13: 3642461662

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"When we give a definition it is for the purpose of using it". HENRI POINCARE in Science and Method A. Objectives The first version of this paper was written to introduce new students and fellows of my laboratory to the mysteries of herpesviruses. Consonant with this design sections dealing with well documented data were trimmed to the bone whereas many obscure phenomena, controversial data and seemingly trivial observations were discussed generously and at length. There is some doubt as to whether it was meant to be published, but it was not a review. The objective of reviews is frequently to bring order. But alas, even the most fluent summation of credible data frequently makes dull reading and too much plausible order, like very little entropy in chemical reactions, is not the most suitable environment on which to nurture the urge to discover. This version is more charitable but not less inbalanced. The bibliography reflects the intent of the paper and was updated last in December of 1968. It should be obvious without saying that no single account such as this can do justice or injustice, as the case may be, to the several hundred papers published on herpesviruses each year or to the many thousand papers published on herpesviruses since the first of the members of the family was experimentally transmitted to a heterologous host more than half a century ago (GRUTER, 1924). B. Definition 1.


Biofouling Methods

Biofouling Methods

Author: Sergey Dobretsov

Publisher: John Wiley & Sons

Published: 2014-08-04

Total Pages: 556

ISBN-13: 1118336119

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Biofouling Methods provides a “cook book” for both established workers and those new to the field. The methods included in this important new book range from tried and tested techniques to those at the cutting edge, encompassing the full diversity of this multidisciplinary field. The book covers methods for microbial and macrofouling, coatings and biocides, and ranges from methods for fundamental studies to methods relevant for industrial applications. There is an emphasis on answering questions and each chapter provides technical methods and problem-solving hints and tips. Bringing together a wealth of international contributions and edited by three internationally known and respected experts in the subject Biofouling Methods is the essential methodology reference in the field for all those working in the antifouling industry including those involved in formulation of antifouling products such as paints and other coatings. Aquatic biologists, ecologists, environmental scientists and lawyers, marine engineers, aquaculture personnel, chemists, and medical researchers will all find much of interest within this book. All universities and research establishments where these subjects are studied and taught should have copies of this important work on their shelves.


Bioelectrochemical Systems

Bioelectrochemical Systems

Author: Korneel Rabaey

Publisher: IWA Publishing

Published: 2009-12-01

Total Pages: 525

ISBN-13: 184339233X

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In the context of wastewater treatment, Bioelectrochemical Systems (BESs) have gained considerable interest in the past few years, and several BES processes are on the brink of application to this area. This book, written by a large number of world experts in the different sub-topics, describes the different aspects and processes relevant to their development. Bioelectrochemical Systems (BESs) use micro-organisms to catalyze an oxidation and/or reduction reaction at an anodic and cathodic electrode respectively. Briefly, at an anode oxidation of organic and inorganic electron donors can occur. Prime examples of such electron donors are waste organics and sulfides. At the cathode, an electron acceptor such as oxygen or nitrate can be reduced. The anode and the cathode are connected through an electrical circuit. If electrical power is harvested from this circuit, the system is called a Microbial Fuel Cell; if electrical power is invested, the system is called a Microbial Electrolysis Cell. The overall framework of bio-energy and bio-fuels is discussed. A number of chapters discuss the basics – microbiology, microbial ecology, electrochemistry, technology and materials development. The book continues by highlighting the plurality of processes based on BES technology already in existence, going from wastewater based reactors to sediment based bio-batteries. The integration of BESs into existing water or process lines is discussed. Finally, an outlook is provided of how BES will fit within the emerging biorefinery area.


Nucleic Acid Techniques in Bacterial Systematics

Nucleic Acid Techniques in Bacterial Systematics

Author: Erko Stackebrandt

Publisher:

Published: 1991-04-19

Total Pages: 370

ISBN-13:

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One of a series whose aim is to identify specialist areas in microbiology and to provide up-to-date methodological information for laboratory microbiologists, active researchers and graduate students. This volume addresses nucleic acid techniques in bacterial systematics.


Microbial Glycobiology

Microbial Glycobiology

Author: Anthony P Moran

Publisher: Elsevier

Published: 2009-10-01

Total Pages: 1037

ISBN-13: 0080923240

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This book presents in an easy-to-read format a summary of the important central aspects of microbial glycobiology, i.e. the study of carbohydrates as related to the biology of microorganisms. Microbial glycobiology represents a multidisciplinary and emerging area with implications for a range of basic and applied research fields, as well as having industrial, medical and biotechnological implications. - Individual chapters provided by leading international scientists in the field yield insightful, concise and stimulating reviews - Provides researchers with an overview and synthesis of the latest research - Each chapter begins with a brief 200 word Summary/Abstract detailing the topic and focus of the chapter, as well as the concepts to be addressed - Allows researchers to see at a glance what each chapter will cover - Each chapter includes a Research Focus Box - Identifies important problems that still need to be solved and areas that require further investigation


Bergey's Manual® of Systematic Bacteriology

Bergey's Manual® of Systematic Bacteriology

Author: Don J. Brenner

Publisher: Springer Science & Business Media

Published: 2007-12-14

Total Pages: 1128

ISBN-13: 0387280227

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Includes a description of the Gammaproteobacteria (1203 pages, 222 figures, and 300 tables). This large taxon includes many well known medically and environmentally important groups. Especially notable are the Enterobacteriaceae, Aeromonas, Beggiatoa, Chromatium, Legionella, Nitrococcus, Oceanospirillum, Pseudomonas, Rickettsiella, Vibrio, Xanthomonas and 155 additional genera.


Hunter's Tropical Medicine and Emerging Infectious Diseases E-Book

Hunter's Tropical Medicine and Emerging Infectious Diseases E-Book

Author: Edward T Ryan

Publisher: Elsevier Health Sciences

Published: 2019-03-25

Total Pages: 1265

ISBN-13: 0323625509

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New emerging diseases, new diagnostic modalities for resource-poor settings, new vaccine schedules ... all significant, recent developments in the fast-changing field of tropical medicine. Hunter's Tropical Medicine and Emerging Infectious Diseases, 10th Edition, keeps you up to date with everything from infectious diseases and environmental issues through poisoning and toxicology, animal injuries, and nutritional and micronutrient deficiencies that result from traveling to tropical or subtropical regions. This comprehensive resource provides authoritative clinical guidance, useful statistics, and chapters covering organs, skills, and services, as well as traditional pathogen-based content. You'll get a full understanding of how to recognize and treat these unique health issues, no matter how widespread or difficult to control. - Includes important updates on malaria, leishmaniasis, tuberculosis and HIV, as well as coverage of Ebola, Zika virus, Chikungunya, and other emerging pathogens. - Provides new vaccine schedules and information on implementation. - Features five all-new chapters: Neglected Tropical Diseases: Public Health Control Programs and Mass Drug Administration; Health System and Health Care Delivery; Zika; Medical Entomology; and Vector Control – as well as 250 new images throughout. - Presents the common characteristics and methods of transmission for each tropical disease, as well as the applicable diagnosis, treatment, control, and disease prevention techniques. - Contains skills-based chapters such as dentistry, neonatal pediatrics and ICMI, and surgery in the tropics, and service-based chapters such as transfusion in resource-poor settings, microbiology, and imaging. - Discusses maladies such as delusional parasitosis that are often seen in returning travelers, including those making international adoptions, transplant patients, medical tourists, and more. - Enhanced eBook version included with purchase, which allows you to access all of the text, figures, and references from the book on a variety of devices.


The Perfect Slime

The Perfect Slime

Author: Hans-Curt Flemming

Publisher: IWA Publishing

Published: 2016-09-15

Total Pages: 336

ISBN-13: 1780407416

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The Perfect Slime presents the latest state of knowledge and all aspects of the Extracellular Polymeric Substances, (EPS) matrix – from the ecological and health to the antifouling perspectives. The book brings together all the current material in order to expand our understanding of the functions, properties and characteristics of the matrix as well as the possibilities to strengthen or weaken it. The EPS matrix represents the immediate environment in which biofilm organisms live. From their point of view, this matrix has paramount advantages. It allows them to stay together for extended periods and form synergistic microconsortia, it retains extracellular enzymes and turns the matrix into an external digestion system and it is a universal recycling yard, it protects them against desiccation, it allows for intense communication and represents a huge genetic archive. They can remodel their matrix, break free and eventually, they can use it as a nutrient source. The EPS matrix can be considered as one of the emergent properties of biofilms and are a major reason for the success of this form of life. Nevertheless, they have been termed the “black matter of biofilms” for good reasons. First of all: the isolation methods define the results. In most cases, only water soluble EPS components are investigated; insoluble ones such as cellulose or amyloids are much less included. In particular in environmental biofilms with many species, it is difficult to impossible isolate, separate the various EPS molecules they are encased in and to define which species produced which EPS. The regulation and the factors which trigger or inhibit EPS production are still very poorly understood. Furthermore: bacteria are not the only microorganisms to produce EPS. Archaea, Fungi and algae can also form EPS. This book investigates the questions, What is their composition, function, dynamics and regulation? What do they all have in common?