Plant Single Cell Type Systems Biology

Plant Single Cell Type Systems Biology

Author:

Publisher:

Published: 2016

Total Pages: 0

ISBN-13:

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The phenotype of a plant in response to a stress condition is the reflection of the molecular responses in different cell-types composing the plant. The multicellular complexity represents a challenge when accessing specific responses of each cell or cell type composing the plant. To overcome this difficulty and allow the clear characterization of the plant cell molecular mechanisms, the research community is now focusing on studying a single cell and single cell-types. The isolation of plant single cells is limited by the cell wall that confers the rigidity of the plant and its overall structure. Various methods have been developed for isolating plant cells (e.g. laser capture microdissection; cell sorting of Green Fluorescent Protein (GFP)-tagged protoplasts, differential protoplastization of cells such as guard cells, isolation of easily accessible cell types such as cotton fiber, pollen cells, trichomes and root hair cells). The development of these innovative approaches to isolate single plant cells or cell-types combined with the application of sensitive and high-throughput technologies allows a better analysis of the developmental processes and response to environmental stresses. Ultimately, single plant cell and cell-type biology will lead to establishment of more reliable and accurate -molecular regulatory networks at the resolution of basic life unit. The goal of this Research Topic is to cover new technological and biological advances in the study of plant single cell, cell-type and systems biology.


Signal Transduction in Stomatal Guard Cells

Signal Transduction in Stomatal Guard Cells

Author: Agepati S Raghavendra

Publisher: Frontiers Media SA

Published: 2017-05-03

Total Pages: 107

ISBN-13: 2889451674

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Stomata, the tiny pores on leaf surface, are the gateways for CO2 uptake during photosynthesis as well as water loss in transpiration. Further, plants use stomatal closure as a defensive response, often triggered by elicitors, to prevent the entry of pathogens. The guard cells are popular model systems to study the signalling mechanism in plant cells. The messengers that mediate closure upon perception of elicitors or microbe associated molecular patterns (MAMPs) are quite similar to those during ABA effects. These components include reactive oxygen species (ROS), nitric oxide (NO), cytosolic pH and intracellular Ca2+. The main components are ROS, NO and cytosolic free Ca2+. The list extends to others, such as G-proteins, protein phosphatases, protein kinases, phospholipids and ion channels. The sequence of these signalling components and their interaction during stomatal signalling are complex and quite interesting. The present e-Book provides a set of authoritative articles from ‘Special Research Topic’ on selected areas of stomatal guard cells. In the first set of two articles, an overview of ABA and MAMPs as signals is presented. The next set of 4 articles, emphasize the role of ROS, NO, Ca2+ as well as pH, as secondary messengers. The next group of 3 articles highlight the recent advances on post-translational modification of guard cell proteins, with emphasis on 14-3-3 proteins and MAPK cascades. The last article described the method to isolate epidermis of grass species and monitor stomatal responses to different signals. Our e-Book is a valuable and excellent source of information for all those interested in guard cell function as well as signal transduction in plant cells.


Plant Single Cell Type Systems Biology

Plant Single Cell Type Systems Biology

Author: Marc Libault

Publisher: Frontiers Media SA

Published: 2016-09-06

Total Pages: 151

ISBN-13: 2889199487

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The phenotype of a plant in response to a stress condition is the reflection of the molecular responses in different cell-types composing the plant. The multicellular complexity represents a challenge when accessing specific responses of each cell or cell type composing the plant. To overcome this difficulty and allow the clear characterization of the plant cell molecular mechanisms, the research community is now focusing on studying a single cell and single cell-types. The isolation of plant single cells is limited by the cell wall that confers the rigidity of the plant and its overall structure. Various methods have been developed for isolating plant cells (e.g. laser capture microdissection; cell sorting of Green Fluorescent Protein (GFP)-tagged protoplasts, differential protoplastization of cells such as guard cells, isolation of easily accessible cell types such as cotton fiber, pollen cells, trichomes and root hair cells). The development of these innovative approaches to isolate single plant cells or cell-types combined with the application of sensitive and high-throughput technologies allows a better analysis of the developmental processes and response to environmental stresses. Ultimately, single plant cell and cell-type biology will lead to establishment of more reliable and accurate -molecular regulatory networks at the resolution of basic life unit. The goal of this Research Topic is to cover new technological and biological advances in the study of plant single cell, cell-type and systems biology.


Plant Systems Biology

Plant Systems Biology

Author: Sacha Baginsky

Publisher: Springer Science & Business Media

Published: 2007-06-25

Total Pages: 362

ISBN-13: 376437439X

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This volume aims to provide a timely view of the state-of-the-art in systems biology. The editors take the opportunity to define systems biology as they and the contributing authors see it, and this will lay the groundwork for future studies. The volume is well-suited to both students and researchers interested in the methods of systems biology. Although the focus is on plant systems biology, the proposed material could be suitably applied to any organism.


MALDI Mass Spectrometry Imaging

MALDI Mass Spectrometry Imaging

Author: Tiffany Siegel Porta

Publisher: Royal Society of Chemistry

Published: 2021-12-03

Total Pages: 541

ISBN-13: 1839162414

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This book gathers knowledge about matrix-assisted laser desorption ionisation (MALDI) mass spectrometry imaging for postgraduate and professional researchers in academia and in industry where it has direct application to clinical research.


Plant Cell Walls

Plant Cell Walls

Author: Nicholas C. Carpita

Publisher: Springer

Published: 2012-12-06

Total Pages: 333

ISBN-13: 9401006687

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This work is a comprehensive collection of articles that cover aspects of cell wall research in the genomic era. Some 2500 genes are involved in some way in wall biogenesis and turnover, from generation of substrates, to polysaccharide and lignin synthesis, assembly, and rearrangement in the wall. Although a great number of genes and gene families remain to be characterized, this issue provides a census of the genes that have been discovered so far. The articles comprising this issue not only illustrate the enormous progress made in identifying the wealth of wall-related genes but they also show the future directions and how far we have to go. As cell walls are an enormously important source of raw material, we anticipate that cell-wall-related genes are of significant economic importance. Examples include the modification of pectin-cross-linking or cell-cell adhesion to increase shelf life of fruits and vegetables, the enhancement of dietary fiber contents of cereals, the improvement of yield and quality of fibers, and the relative allocation of carbon to wall biomass for use as biofuels. The book is intended for academic and professional scientists working in the area of plant biology as well as material chemists and engineers, and food scientists who define new ways to use cell walls.


Mathematical Modelling in Plant Biology

Mathematical Modelling in Plant Biology

Author: Richard J. Morris

Publisher: Springer

Published: 2018-11-05

Total Pages: 230

ISBN-13: 3319990705

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Progress in plant biology relies on the quantification, analysis and mathematical modeling of data over different time and length scales. This book describes common mathematical and computational approaches as well as some carefully chosen case studies that demonstrate the use of these techniques to solve problems at the forefront of plant biology. Each chapter is written by an expert in field with the goal of conveying concepts whilst at the same time providing sufficient background and links to available software for readers to rapidly build their own models and run their own simulations. This book is aimed at postgraduate students and researchers working the field of plant systems biology and synthetic biology, but will also be a useful reference for anyone wanting to get into quantitative plant biology.


Plant Ecophysiology

Plant Ecophysiology

Author: Majeti Narasimha Vara Prasad

Publisher: John Wiley & Sons

Published: 1996-12-24

Total Pages: 562

ISBN-13: 9780471131571

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Twenty-nine, prominent, international researchers provide contributions which deal with understanding the basic ecophysiological and molecular principles governing the functioning of plant systems in relation to their environment. Divided into two headings: biotic and abiotic; the first consists of abiotic, natural environmental factors--light, ultraviolet radiation, chilling and freezing, high temperatures, drought, flooding, salt and trace metals. The latter half presents anthropogenic aspects including allelochemicals, herbicides, polyamines, air pollutants, carbon dioxide, radioisotopes and fire.


Plant Cell Biology

Plant Cell Biology

Author: Randy O. Wayne

Publisher: Academic Press

Published: 2018-11-13

Total Pages: 748

ISBN-13: 012814372X

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Plant Cell Biology, Second Edition: From Astronomy to Zoology connects the fundamentals of plant anatomy, plant physiology, plant growth and development, plant taxonomy, plant biochemistry, plant molecular biology, and plant cell biology. It covers all aspects of plant cell biology without emphasizing any one plant, organelle, molecule, or technique. Although most examples are biased towards plants, basic similarities between all living eukaryotic cells (animal and plant) are recognized and used to best illustrate cell processes. This is a must-have reference for scientists with a background in plant anatomy, plant physiology, plant growth and development, plant taxonomy, and more. - Includes chapter on using mutants and genetic approaches to plant cell biology research and a chapter on -omic technologies - Explains the physiological underpinnings of biological processes to bring original insights relating to plants - Includes examples throughout from physics, chemistry, geology, and biology to bring understanding on plant cell development, growth, chemistry and diseases - Provides the essential tools for students to be able to evaluate and assess the mechanisms involved in cell growth, chromosome motion, membrane trafficking and energy exchange