Large Scale Data Handling in Biology
Author:
Publisher: Bookboon
Published:
Total Pages: 53
ISBN-13: 8776815552
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Big Data Analytics in Bioinformatics and Healthcare
Author: Wang, Baoying
Publisher: IGI Global
Published: 2014-10-31
Total Pages: 552
ISBN-13: 1466666129
DOWNLOAD EBOOKAs technology evolves and electronic data becomes more complex, digital medical record management and analysis becomes a challenge. In order to discover patterns and make relevant predictions based on large data sets, researchers and medical professionals must find new methods to analyze and extract relevant health information. Big Data Analytics in Bioinformatics and Healthcare merges the fields of biology, technology, and medicine in order to present a comprehensive study on the emerging information processing applications necessary in the field of electronic medical record management. Complete with interdisciplinary research resources, this publication is an essential reference source for researchers, practitioners, and students interested in the fields of biological computation, database management, and health information technology, with a special focus on the methodologies and tools to manage massive and complex electronic information.
Analysis Of Biological Data: A Soft Computing Approach
Author: Sanghamitra Bandyopadhyay
Publisher: World Scientific
Published: 2007-09-03
Total Pages: 353
ISBN-13: 9814475122
DOWNLOAD EBOOKBioinformatics, a field devoted to the interpretation and analysis of biological data using computational techniques, has evolved tremendously in recent years due to the explosive growth of biological information generated by the scientific community. Soft computing is a consortium of methodologies that work synergistically and provides, in one form or another, flexible information processing capabilities for handling real-life ambiguous situations. Several research articles dealing with the application of soft computing tools to bioinformatics have been published in the recent past; however, they are scattered in different journals, conference proceedings and technical reports, thus causing inconvenience to readers, students and researchers.This book, unique in its nature, is aimed at providing a treatise in a unified framework, with both theoretical and experimental results, describing the basic principles of soft computing and demonstrating the various ways in which they can be used for analyzing biological data in an efficient manner. Interesting research articles from eminent scientists around the world are brought together in a systematic way such that the reader will be able to understand the issues and challenges in this domain, the existing ways of tackling them, recent trends, and future directions. This book is the first of its kind to bring together two important research areas, soft computing and bioinformatics, in order to demonstrate how the tools and techniques in the former can be used for efficiently solving several problems in the latter.
Realtime Analysis of Large-Scale Data
Author: Daniel Becker
Publisher:
Published: 2020-10-09
Total Pages: 120
ISBN-13: 9781013281983
DOWNLOAD EBOOKIn photon science more and more data are taken. It is not possible anymore to store and process all data offline. In this book, we explore strategies for handling this large amount of data. A neural network as well as techniques from image processing are used to efficiently categorize and select useful data. We also indicate why many sophisticated algorithms cannot be used in this context. In addition, a prototype for data selection is presented, discussed, and benchmarked. This work was published by Saint Philip Street Press pursuant to a Creative Commons license permitting commercial use. All rights not granted by the work's license are retained by the author or authors.
Large Scale Data Analytics
Author: Chung Yik Cho
Publisher: Springer
Published: 2019-01-09
Total Pages: 97
ISBN-13: 3030038920
DOWNLOAD EBOOKThis book presents a language integrated query framework for big data. The continuous, rapid growth of data information to volumes of up to terabytes (1,024 gigabytes) or petabytes (1,048,576 gigabytes) means that the need for a system to manage and query information from large scale data sources is becoming more urgent. Currently available frameworks and methodologies are limited in terms of efficiency and querying compatibility between data sources due to the differences in information storage structures. For this research, the authors designed and programmed a framework based on the fundamentals of language integrated query to query existing data sources without the process of data restructuring. A web portal for the framework was also built to enable users to query protein data from the Protein Data Bank (PDB) and implement it on Microsoft Azure, a cloud computing environment known for its reliability, vast computing resources and cost-effectiveness.
Catalyzing Inquiry at the Interface of Computing and Biology
Author: National Research Council
Publisher: National Academies Press
Published: 2006-01-01
Total Pages: 469
ISBN-13: 030909612X
DOWNLOAD EBOOKAdvances in computer science and technology and in biology over the last several years have opened up the possibility for computing to help answer fundamental questions in biology and for biology to help with new approaches to computing. Making the most of the research opportunities at the interface of computing and biology requires the active participation of people from both fields. While past attempts have been made in this direction, circumstances today appear to be much more favorable for progress. To help take advantage of these opportunities, this study was requested of the NRC by the National Science Foundation, the Department of Defense, the National Institutes of Health, and the Department of Energy. The report provides the basis for establishing cross-disciplinary collaboration between biology and computing including an analysis of potential impediments and strategies for overcoming them. The report also presents a wealth of examples that should encourage students in the biological sciences to look for ways to enable them to be more effective users of computing in their studies.
Computational Biology
Author: Röbbe Wünschiers
Publisher: Springer
Published: 2013-02-01
Total Pages: 449
ISBN-13: 9783642347504
DOWNLOAD EBOOKThis greatly expanded 2nd edition provides a practical introduction to - data processing with Linux tools and the programming languages AWK and Perl - data management with the relational database system MySQL, and - data analysis and visualization with the statistical computing environment R for students and practitioners in the life sciences. Although written for beginners, experienced researchers in areas involving bioinformatics and computational biology may benefit from numerous tips and tricks that help to process, filter and format large datasets. Learning by doing is the basic concept of this book. Worked examples illustrate how to employ data processing and analysis techniques, e.g. for - finding proteins potentially causing pathogenicity in bacteria, - supporting the significance of BLAST with homology modeling, or - detecting candidate proteins that may be redox-regulated, on the basis of their structure. All the software tools and datasets used are freely available. One section is devoted to explaining setup and maintenance of Linux as an operating system independent virtual machine. The author's experiences and knowledge gained from working and teaching in both academia and industry constitute the foundation for this practical approach.
ADVANCES IN BIOINFORMATICS AND BIG DATA ANALYTICS.
Author: SUJATA. DASH
Publisher:
Published: 2023
Total Pages: 0
ISBN-13: 9788886976930
DOWNLOAD EBOOKBioinformatics Data Skills
Author: Vince Buffalo
Publisher: "O'Reilly Media, Inc."
Published: 2015-07
Total Pages: 538
ISBN-13: 1449367518
DOWNLOAD EBOOKLearn the data skills necessary for turning large sequencing datasets into reproducible and robust biological findings. With this practical guide, youâ??ll learn how to use freely available open source tools to extract meaning from large complex biological data sets. At no other point in human history has our ability to understand lifeâ??s complexities been so dependent on our skills to work with and analyze data. This intermediate-level book teaches the general computational and data skills you need to analyze biological data. If you have experience with a scripting language like Python, youâ??re ready to get started. Go from handling small problems with messy scripts to tackling large problems with clever methods and tools Process bioinformatics data with powerful Unix pipelines and data tools Learn how to use exploratory data analysis techniques in the R language Use efficient methods to work with genomic range data and range operations Work with common genomics data file formats like FASTA, FASTQ, SAM, and BAM Manage your bioinformatics project with the Git version control system Tackle tedious data processing tasks with with Bash scripts and Makefiles
Frontiers in Massive Data Analysis
Author: National Research Council
Publisher: National Academies Press
Published: 2013-09-03
Total Pages: 191
ISBN-13: 0309287812
DOWNLOAD EBOOKData mining of massive data sets is transforming the way we think about crisis response, marketing, entertainment, cybersecurity and national intelligence. Collections of documents, images, videos, and networks are being thought of not merely as bit strings to be stored, indexed, and retrieved, but as potential sources of discovery and knowledge, requiring sophisticated analysis techniques that go far beyond classical indexing and keyword counting, aiming to find relational and semantic interpretations of the phenomena underlying the data. Frontiers in Massive Data Analysis examines the frontier of analyzing massive amounts of data, whether in a static database or streaming through a system. Data at that scale-terabytes and petabytes-is increasingly common in science (e.g., particle physics, remote sensing, genomics), Internet commerce, business analytics, national security, communications, and elsewhere. The tools that work to infer knowledge from data at smaller scales do not necessarily work, or work well, at such massive scale. New tools, skills, and approaches are necessary, and this report identifies many of them, plus promising research directions to explore. Frontiers in Massive Data Analysis discusses pitfalls in trying to infer knowledge from massive data, and it characterizes seven major classes of computation that are common in the analysis of massive data. Overall, this report illustrates the cross-disciplinary knowledge-from computer science, statistics, machine learning, and application disciplines-that must be brought to bear to make useful inferences from massive data.
