Bioinformatics offers novel tools and resources to analyze plant genomes and genes. The complete genomes of two important commercial palms (dates and oil palm) have recently been sequenced. This offers scope for many computational tools to decipher the synteny, collinearity and common and unique genes of palms. This book reviews the latest developments in this field. Includes the latest information on the molecular breeding and bioinformatics of palms Covers past and current work and future opportunities Written in simple language avoiding technical jargon
This book is the first volume of a comprehensive assemblage of contemporary knowledge relevant to genomics and other omics in date palm. Volume 1 consists of 11 chapters arranged in 3 parts grouped according to subject. Part I, Biology and Phylogeny, focuses on date palm biology, evolution and origin. Part II, Biodiversity and Molecular Identification, covers conformity of in vitro derived plants, molecular markers, barcoding, pollinizer genetics and gender determination. Part III, Genome Mapping and Bioinformatics, addresses genome mapping of nuclear, chloroplast and mitochondrial DNA, in addition to a chapter on progress made in date palm bioinformatics. This volume represents the efforts of 30 international scientists from 10 countries and contains 78 figures and 30 tables to illustrate presented concepts. Volume 2 is published under the title: Omics and Molecular Breeding.
This book is the first comprehensive assemblage of contemporary knowledge relevant to genomics and other omics in date palm. Volume 2 consists of 11 chapters. Part I, Nutritional and Pharmaceuticals Properties, covers the utilization of date palm as an ingredient of various food products, a source of bioactive compounds and the production of nanomaterials. Part II, Omics Technologies, addresses omics resources, proteomics and metabolomics. Part III, Molecular Breeding and Genome Modification, focuses on genetic improvement technologies based on mutagenesis, quantitative traits loci and genome editing. Part IV, Genomics of Abiotic and Biotic Stress, covers metagenomics of beneficial microbes to enhance tolerance to abiotic stress and the various genomics advances as they apply to insect control. This volume represents the efforts of 34 international scientists from 12 countries and contains 65 figures and 19 tables to illustrate presented concepts. Volume 1 is published under the title: Phylogeny, Biodiversity and Mapping.
Trees that are indispensably supportive to human life pose a formidable challenge to breed them to suit to human needs. From soft drinks to breweries to beverages to oil to tires, the value added products from trees give a spectrum of products to human kind. While attempts to tap these resources through conventional breeding are underway, the quick and elegant way of manipulating the genetic systems at the genome level is an essential chapter of modern science. Books featuring genomics of tree crops are few, and genomics is such a science that changes rapidly. Genomics of Tree Crops is an earnest attempt towards compiling genomics of tree crops. Plant genomics has made monumental strides in the last decade providing insights into intra-genomic phenomena such as heterosis, epistasis, pleiotropy and other interactions between loci and alleles within the genome. In contrast, the investigation of the roles and functions of single genes is a primary focus of molecular biology and is a common topic of modern genetic research. A genome is the sum total of all of an individual organism's genes. Thus, genomics is the study of all the genes of a cell, or tissue, at the DNA (genotype), mRNA (transcriptome), or protein (proteome) levels. The complete sequencing of the three billion base pair human genome with 25,000 genes identified and the invention of DNA microarrays ushered in a new era in the science of genomics leading to explosive advancements in oncology diagnostics. This impetus into the genomics era lead the way toward advances in plant genomics which started with Arabidopsis thaliana and went through an array of crops such as rice, maize, papaya, various cereals and legumes, with pigeon pea added to the list towards the end of 2011. Trees, on the other hand, are the least attended taxa with regard to genomic research. Some of the areas that attained attention of the scientists are: DNA sequencing, bioinformatics, genomics of flowering, gene flow, spatial structure, local adaptation and assisted migration in trees, transformation of fruit trees, genomics of tropical and temperate fruit trees, genomics of Hevea rubber, genomics of papaya and genomics of palms. Genomics of Tree Crops compiles this information with chapters authored by experts on these crops.
The oil palm is a remarkable crop, producing around 40% of the world’s vegetable oil from around 6% of the land devoted to oil crops. Conventional breeding has clearly been the major focus of genetic improvement in this crop. A mix of improved agronomy and management, coupled with breeding selection have quadrupled the oil yield of the crop since breeding began in earnest in the 1920s. However, as for all perennial crops with long breeding cycles, oil palm faces immense challenges in the coming years with increased pressure from population growth, climate change and the need to develop environmentally sustainable oil palm plantations. In Oil Palm: Breeding, Genetics and Genomics, world leading organizations and individuals who have been at the forefront of developments in this crop, provide their insights and experiences of oil palm research, while examining the different challenges that face the future of the oil palm. The editors have all been involved in research and breeding of oil palm for many years and use their knowledge of the crop and their disciplinary expertise to provide context and to introduce the different research topics covered.
Widely known as the ‘tree of life’, coconut (Cocos nucifera L.) provides a bountiful source for making a wide variety of healthy foods and industrial items. Its cultivation, however, has been encountering seriously destructive issues including lethal diseases and natural adversities which are currently distressing livelihoods of millions of small-holder farmers around the world. There is an urgent mandate to resolve these issues by meeting sustainable seedling production, facilitating genetic conservation, as well as developing disease identification and modern breeding. This book introduces improvements in coconut biotechnology by covering the advances in micropropagation, germplasm conservation, and molecular pathogenic diagnosis. This comprehensive volume will be a useful source of information and references to researchers, graduate students, agricultural developers, and scholars in the plant sciences. In order to benefit general readers, the book also covers fundamental aspects of biology, diversity, and evolution of this marvelous palm species.
This book is the first volume of a comprehensive assemblage of contemporary knowledge relevant to genomics and other omics in date palm. Volume 1 consists of 11 chapters arranged in 3 parts grouped according to subject. Part I, Biology and Phylogeny, focuses on date palm biology, evolution and origin. Part II, Biodiversity and Molecular Identification, covers conformity of in vitro derived plants, molecular markers, barcoding, pollinizer genetics and gender determination. Part III, Genome Mapping and Bioinformatics, addresses genome mapping of nuclear, chloroplast and mitochondrial DNA, in addition to a chapter on progress made in date palm bioinformatics. This volume represents the efforts of 30 international scientists from 10 countries and contains 78 figures and 30 tables to illustrate presented concepts. Volume 2 is published under the title: Omics and Molecular Breeding.
This book provides complete, comprehensive, and broad subject-based reviews for students, teachers, researchers, policymakers, conservationists, and NGOs interested in the biodiversity and conservation of woody plants. Forests cover approximately 31 percent of the world’s total landmass; 93 percent is natural forest and only 7 percent consists of planted trees. Forest decline is progressing at an alarming rate worldwide. In addition to human activities (logging, deforestation, and exploiting forest lands for agriculture and industrial use), a number of other factors – including pests and diseases, drought, soil acidity, radiation, and ozone – are cumulatively contributing to global forest decline. The present situation forces us to focus on forest conservation strategies for the present and future. Gene conservation and maintaining genetic diversity in forest ecosystems are crucial to the preservation of forest genetic resources. This calls for integrated action to implement both the in situ (on site) preservation of forest stands and ex situ (distant from the original site) strategies for the conservation of woody plants’ genetic resources. Selected priority areas include: 1) assessing patterns of genetic diversity and threats, 2) understanding the biological processes regulating genetic diversity, 3) assessing the impact of human activities and climate change on genetic diversity, and 5) finding methods for prioritizing species and populations for the conservation of forest trees genetic resources. All chapters were written by leading scientists in their respective fields, which include: woody plant diversity, ecology and evolution; assessment of genetic diversity in forest tree populations; conservation planning under climate change; and in situ and ex situ strategies, including biotechnological approaches, for the conservation of woody plants genetic resources.
Omics in Horticulture Crops presents a comprehensive view of germplasm diversity, genetic evolution, genomics, proteomics and transcriptomics of fruit crops (temperate, tropical and subtropical fruits, fruit nuts, berries), vegetables, tuberous crops, ornamental and floricultural crops and medicinal aromatic plants. Information covering phenomics, genetic diversity, phylogenetic studies, genome sequencing, and genome barcoding through the utilization of molecular markers plays an imperative role in the characterization and effective utilization of diverse germplasm are included in the book. This is a valuable reference for researchers and academics seeking to improve cultivar productivity through enhanced genetic diversity while also retaining optimal traits and protecting the growing environment. - Highlights perspectives, progress and promises of -omics application - Provides a systematic overview of origin, progenitor and domestication process as well as genetic insights - Includes full range of horticultural crops
