Genomic Approaches in Earth and Environmental Sciences
Genomic Approaches in Earth and Environmental Sciences

Author: Gregory Dick

Publisher: John Wiley & Sons

Published: 2018-03-15

Total Pages: 179

ISBN-13: 1118708202

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The first comprehensive synthesis of genomic techniques in earth sciences The past 15 years have witnessed an explosion of DNA sequencing technologies that provide unprecedented insights into biology. Although this technological revolution has been driven by the biomedical sciences, it also offers extraordinary opportunities in the earth and environmental sciences. In particular, the application of "omics" methods (genomics, transcriptomics, proteomics) directly to environmental samples offers exciting new vistas of complex microbial communities and their roles in environmental and geochemical processes. This unique book fills the gap where there exists a lack of resources and infrastructure to educate and train geoscientists about the opportunities, approaches, and analytical methods available in the application of omic technologies to problems in the geosciences. Genomic Approaches in Earth and Environmental Sciences begins by covering the role of microorganisms in earth and environmental processes. It then goes on to discuss how omics approaches provide new windows into geobiological processes. It delves into the DNA sequencing revolution and the impact that genomics has made on the geosciences. The book then discusses the methods used in the field, beginning with an overview of current technologies. After that it offers in-depth coverage of single cell genomics, metagenomics, metatranscriptomics, metaproteomics, and functional approaches, before finishing up with an outlook on the future of the field. The very first synthesis of an important new family of techniques Shows strengths and limitations (both practical and theoretical) of the techniques Deals with both theoretical and laboratory basics Shows use of techniques in a variety of applications, including various aspects of environmental science, geobiology, and evolution Genomic Approaches in Earth and Environmental Sciences is a welcome addition to the library of all earth and environmental scientists and students working within a wide range of subdisciplines.

Genomic Approaches in Earth and Environmental Sciences
Genomic Approaches in Earth and Environmental Sciences

Author: Gregory Dick

Publisher: John Wiley & Sons

Published: 2018-03-15

Total Pages: 206

ISBN-13: 1118708261

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The first comprehensive synthesis of genomic techniques in earth sciences The past 15 years have witnessed an explosion of DNA sequencing technologies that provide unprecedented insights into biology. Although this technological revolution has been driven by the biomedical sciences, it also offers extraordinary opportunities in the earth and environmental sciences. In particular, the application of "omics" methods (genomics, transcriptomics, proteomics) directly to environmental samples offers exciting new vistas of complex microbial communities and their roles in environmental and geochemical processes. This unique book fills the gap where there exists a lack of resources and infrastructure to educate and train geoscientists about the opportunities, approaches, and analytical methods available in the application of omic technologies to problems in the geosciences. Genomic Approaches in Earth and Environmental Sciences begins by covering the role of microorganisms in earth and environmental processes. It then goes on to discuss how omics approaches provide new windows into geobiological processes. It delves into the DNA sequencing revolution and the impact that genomics has made on the geosciences. The book then discusses the methods used in the field, beginning with an overview of current technologies. After that it offers in-depth coverage of single cell genomics, metagenomics, metatranscriptomics, metaproteomics, and functional approaches, before finishing up with an outlook on the future of the field. The very first synthesis of an important new family of techniques Shows strengths and limitations (both practical and theoretical) of the techniques Deals with both theoretical and laboratory basics Shows use of techniques in a variety of applications, including various aspects of environmental science, geobiology, and evolution Genomic Approaches in Earth and Environmental Sciences is a welcome addition to the library of all earth and environmental scientists and students working within a wide range of subdisciplines.

Insight on Environmental Genomics
Insight on Environmental Genomics

Author: Denis Faure

Publisher: Elsevier

Published: 2016-07-11

Total Pages: 176

ISBN-13: 0081010915

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Bringing together the latest methodological and scientific progress in the various research areas in the field of Environmental Genomics, this book discusses the characterization of the structure and dynamics of life, the study of the evolution and adaptation of genes and genomes, the analysis of degraded and/or old DNA, and the functional and genomic ecology of populations and communities. It also considers access to the production and sharing of NGS data and the quality of this data.As the product of the collective discussion of the active French scientific community, the book presents not only the latest technologies in the development of new sequencing methods, but also the resulting issues, challenges and prospects, in order to identify those aspects with the greatest potential for modeling and exploring the function of ecosystems. Includes recent updates from the field of environmental genomics Provides details of advances of methods and perspectives of their use Contains a multidisciplinary overview of the environmental sciences including taxonomy, ecology, evolution, and diversity Focuses on the impact of recent technology advances in high-throughput sequencing

Genomic Approaches for Cross-Species Extrapolation in Toxicology
Genomic Approaches for Cross-Species Extrapolation in Toxicology

Author: William H. Benson

Publisher: CRC Press

Published: 2006-12-13

Total Pages: 218

ISBN-13: 1420043641

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The latest tools for investigating stress response in organisms, genomic technologies provide great insight into how different organisms respond to environmental conditions. However, their usefulness needs to be tested, verified, and codified. Genomic Approaches for Cross-Species Extrapolation in Toxicology provides a balanced discussion drawn from

Environmental Genomics
Environmental Genomics

Author: C. Cristofre Martin

Publisher: Springer Science & Business Media

Published: 2008-01-18

Total Pages: 363

ISBN-13: 1588297772

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Here is a manual for an environmental scientist who wishes to embrace genomics to answer environmental questions. The volume covers: gene expression profiling, whole genome and chromosome mutation detection, and methods to assay genome diversity and polymorphisms within a particular environment. This book provides a systematic framework for determining environmental impact and ensuring human health and the sustainability of natural populations.

Boron Proxies in Paleoceanography and Paleoclimatology
Boron Proxies in Paleoceanography and Paleoclimatology

Author: Bärbel Hönisch

Publisher: John Wiley & Sons

Published: 2019-02-18

Total Pages: 248

ISBN-13: 1119010640

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Anthropogenic carbon dioxide emissions do not only warm our planet but also acidify our oceans. It is currently unclear to which degree Earth’s climate and marine life will be impacted by these changes but information from Earth history, particularly the geochemical signals of past environmental changes stored in the fossil remains of marine organisms, can help us predict possible future changes. This book aims to be a primer for scientists who seek to apply boron proxies in marine carbonates to estimate past seawater carbonate chemistry and atmospheric pCO2. Boron proxies (δ11B and B/Ca) were introduced nearly three decades ago, with subsequent strides being made in understanding their mechanistic functioning. This text reviews current knowledge about the aqueous systematics, the inorganic and biological controls on boron isotope fractionation and incorporation into marine carbonates, as well as the analytical techniques for measurement of boron proxies. Laboratory and field calibrations of the boron proxies are summarized, and similarities between modern calibrations are explored to suggest estimates for proxy sensitivities in marine calcifiers that are now extinct. Example applications illustrate the potential for reconstructing paleo-atmospheric pCO2 from boron isotopes. Also explored are the sensitivity of paleo-ocean acidity and pCO2 reconstructions to boron isotope proxy systematics that are currently less well understood, including the elemental and boron isotopic composition of seawater through time, seawater alkalinity, temperature and salinity, and their collective impact on the uncertainty of paleo-reconstructions. The B/Ca proxy is based on the same mechanistic principles as the boron isotope proxy, but empirical calibrations suggest seawater pH is not the only controlling factor. B/Ca therefore has the potential to provide a second carbonate parameter that could be paired with δ11B to fully constrain the ocean carbonate system, but the associated uncertainties are large. This text reviews and examines what is currently known about the B/Ca proxy systematics. As more scientists embark on characterizing past ocean acidity and atmospheric pCO2, Boron in Paleoceanography and Paleoclimatology provides a resource to introduce geoscientists to the opportunities and complications of boron proxies, including potential avenues to further refine them.

Applied Environmental Genomics
Applied Environmental Genomics

Author: Oliver F... Berry

Publisher: CSIRO PUBLISHING

Published: 2023-12

Total Pages: 369

ISBN-13: 1486314937

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DNA is the essence of life and the original ‘big data’. New technologies are allowing scientists to access and make sense of this information like never before, and they are using it to solve the world’s greatest environmental challenges. Applied Environmental Genomics synthesises the latest and most exciting uses of genomic technologies for environmental science and management. With an emphasis on diversity of applications and real-world demonstrations, leading researchers have contributed detailed chapters on innovative approaches to obtaining critical management-relevant information about the natural world. These chapters are complemented by perspective sections written by environmental managers who describe their experiences using genomics to support evidence-based decisions. Ideal for students, researchers and professionals working in natural resource management and policy, Applied Environmental Genomics is a comprehensive introduction to a fast-moving field that is transforming the practice of environmental management, with profound relevance to industry, government and the public.

Environmental Contamination, Biotechnology, and the Law
Environmental Contamination, Biotechnology, and the Law

Author: National Research Council

Publisher: National Academies Press

Published: 2001-04-25

Total Pages: 44

ISBN-13: 0309170974

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On August 16, 2000, the Board on Life Sciences held a forum on "Environmental Contamination, Biotechnology, and the Law: The Impact of Emerging Genomic Information." The purpose of the forum was to explore the legal implications of current and developing biotechnology approaches to evaluating potential human health and environmental effects caused by exposure to environmental contaminants and to cleaning up contaminated areas. The forum brought together scientists from academe, government, and industry and members of the legal community, including lawyers and judges, to discuss the interface between the use of those approaches and the legal system.

Ecological Genomics
Ecological Genomics

Author: Christian R. Landry

Publisher: Springer Science & Business Media

Published: 2013-11-25

Total Pages: 358

ISBN-13: 9400773471

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Researchers in the field of ecological genomics aim to determine how a genome or a population of genomes interacts with its environment across ecological and evolutionary timescales. Ecological genomics is trans-disciplinary by nature. Ecologists have turned to genomics to be able to elucidate the mechanistic bases of the biodiversity their research tries to understand. Genomicists have turned to ecology in order to better explain the functional cellular and molecular variation they observed in their model organisms. We provide an advanced-level book that covers this recent research and proposes future development for this field. A synthesis of the field of ecological genomics emerges from this volume. Ecological Genomics covers a wide array of organisms (microbes, plants and animals) in order to be able to identify central concepts that motivate and derive from recent investigations in different branches of the tree of life. Ecological Genomics covers 3 fields of research that have most benefited from the recent technological and conceptual developments in the field of ecological genomics: the study of life-history evolution and its impact of genome architectures; the study of the genomic bases of phenotypic plasticity and the study of the genomic bases of adaptation and speciation.

Molecular Geomicrobiology
Molecular Geomicrobiology

Author: Jillian F. Banfield

Publisher: Walter de Gruyter GmbH & Co KG

Published: 2018-12-17

Total Pages: 308

ISBN-13: 1501509551

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Volume 59 of Reviews in Mineralogy and Geochemistry ties together themes common to environmental microbiology, earth science, and astrobiology. The resesarch presented here, the associated short course, and the volume production were supported by funding from many sources, notably the Mineralogical Society of America, the Geochemical Society, the US Department of Energy Chemical Sciences Program and the NASA Astrobiology Institute.