Fundamentals Of Network Biology
Fundamentals Of Network Biology

Author: Wenjun Zhang

Publisher: World Scientific

Published: 2018-05-18

Total Pages: 568

ISBN-13: 1786345102

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As the first comprehensive title on network biology, this book covers a wide range of subjects including scientific fundamentals (graphs, networks, etc) of network biology, construction and analysis of biological networks, methods for identifying crucial nodes in biological networks, link prediction, flow analysis, network dynamics, evolution, simulation and control, ecological networks, social networks, molecular and cellular networks, network pharmacology and network toxicology, big data analytics, and more.Across 12 parts and 26 chapters, with Matlab codes provided for most models and algorithms, this self-contained title provides an in-depth and complete insight on network biology. It is a valuable read for high-level undergraduates and postgraduates in the areas of biology, ecology, environmental sciences, medical science, computational science, applied mathematics, and social science.

A First Course in Network Science
A First Course in Network Science

Author: Filippo Menczer

Publisher: Cambridge University Press

Published: 2020-01-30

Total Pages: 275

ISBN-13: 1108579612

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Networks are everywhere: networks of friends, transportation networks and the Web. Neurons in our brains and proteins within our bodies form networks that determine our intelligence and survival. This modern, accessible textbook introduces the basics of network science for a wide range of job sectors from management to marketing, from biology to engineering, and from neuroscience to the social sciences. Students will develop important, practical skills and learn to write code for using networks in their areas of interest - even as they are just learning to program with Python. Extensive sets of tutorials and homework problems provide plenty of hands-on practice and longer programming tutorials online further enhance students' programming skills. This intuitive and direct approach makes the book ideal for a first course, aimed at a wide audience without a strong background in mathematics or computing but with a desire to learn the fundamentals and applications of network science.

Fundamentals of Molecular Structural Biology
Fundamentals of Molecular Structural Biology

Author: Subrata Pal

Publisher: Academic Press

Published: 2019-08-15

Total Pages: 518

ISBN-13: 0128148551

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Fundamentals of Molecular Structural Biology reviews the mathematical and physical foundations of molecular structural biology. Based on these fundamental concepts, it then describes molecular structure and explains basic genetic mechanisms. Given the increasingly interdisciplinary nature of research, early career researchers and those shifting into an adjacent field often require a "fundamentals" book to get them up-to-speed on the foundations of a particular field. This book fills that niche.

Networks
Networks

Author: Mark Newman

Publisher: OUP Oxford

Published: 2010-03-25

Total Pages: 789

ISBN-13: 0191500704

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The scientific study of networks, including computer networks, social networks, and biological networks, has received an enormous amount of interest in the last few years. The rise of the Internet and the wide availability of inexpensive computers have made it possible to gather and analyze network data on a large scale, and the development of a variety of new theoretical tools has allowed us to extract new knowledge from many different kinds of networks. The study of networks is broadly interdisciplinary and important developments have occurred in many fields, including mathematics, physics, computer and information sciences, biology, and the social sciences. This book brings together for the first time the most important breakthroughs in each of these fields and presents them in a coherent fashion, highlighting the strong interconnections between work in different areas. Subjects covered include the measurement and structure of networks in many branches of science, methods for analyzing network data, including methods developed in physics, statistics, and sociology, the fundamentals of graph theory, computer algorithms, and spectral methods, mathematical models of networks, including random graph models and generative models, and theories of dynamical processes taking place on networks.

Biological Networks
Biological Networks

Author: Fran‡ois K‚pŠs

Publisher: World Scientific

Published: 2007

Total Pages: 531

ISBN-13: 981270695X

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This volume presents a timely and comprehensive overview of biological networks at all organization levels in the spirit of the complex system approach. It discusses the transversal issues and fundamental principles as well as the overall structure, dynamics, and modeling of a wide array of biological networks at the molecular, cellular, and population levels. Anchored in both empirical data and a strong theoretical background, the book therefore lends valuable credence to the complex systems approach.

Fundamentals of Complex Networks
Fundamentals of Complex Networks

Author: Guanrong Chen

Publisher: John Wiley & Sons

Published: 2015-06-29

Total Pages: 384

ISBN-13: 1118718119

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Complex networks such as the Internet, WWW, transportation networks, power grids, biological neural networks, and scientific cooperation networks of all kinds provide challenges for future technological development. • The first systematic presentation of dynamical evolving networks, with many up-to-date applications and homework projects to enhance study • The authors are all very active and well-known in the rapidly evolving field of complex networks • Complex networks are becoming an increasingly important area of research • Presented in a logical, constructive style, from basic through to complex, examining algorithms, through to construct networks and research challenges of the future

Fundamentals of Systems Biology
Fundamentals of Systems Biology

Author: Markus W. Covert

Publisher: CRC Press

Published: 2017-10-19

Total Pages: 367

ISBN-13: 1498728472

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For decades biology has focused on decoding cellular processes one gene at a time, but many of the most pressing biological questions, as well as diseases such as cancer and heart disease, are related to complex systems involving the interaction of hundreds, or even thousands, of gene products and other factors. How do we begin to understand this complexity? Fundamentals of Systems Biology: From Synthetic Circuits to Whole-cell Models introduces students to methods they can use to tackle complex systems head-on, carefully walking them through studies that comprise the foundation and frontier of systems biology. The first section of the book focuses on bringing students quickly up to speed with a variety of modeling methods in the context of a synthetic biological circuit. This innovative approach builds intuition about the strengths and weaknesses of each method and becomes critical in the book’s second half, where much more complicated network models are addressed—including transcriptional, signaling, metabolic, and even integrated multi-network models. The approach makes the work much more accessible to novices (undergraduates, medical students, and biologists new to mathematical modeling) while still having much to offer experienced modelers--whether their interests are microbes, organs, whole organisms, diseases, synthetic biology, or just about any field that investigates living systems.

Network Science
Network Science

Author: Ted G. Lewis

Publisher: John Wiley & Sons

Published: 2011-09-20

Total Pages: 440

ISBN-13: 1118211014

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A comprehensive look at the emerging science of networks Network science helps you design faster, more resilient communication networks; revise infrastructure systems such as electrical power grids, telecommunications networks, and airline routes; model market dynamics; understand synchronization in biological systems; and analyze social interactions among people. This is the first book to take a comprehensive look at this emerging science. It examines the various kinds of networks (regular, random, small-world, influence, scale-free, and social) and applies network processes and behaviors to emergence, epidemics, synchrony, and risk. The book's uniqueness lies in its integration of concepts across computer science, biology, physics, social network analysis, economics, and marketing. The book is divided into easy-to-understand topical chapters and the presentation is augmented with clear illustrations, problems and answers, examples, applications, tutorials, and a discussion of related Java software. Chapters cover: Origins Graphs Regular Networks Random Networks Small-World Networks Scale-Free Networks Emergence Epidemics Synchrony Influence Networks Vulnerability Net Gain Biology This book offers a new understanding and interpretation of the field of network science. It is an indispensable resource for researchers, professionals, and technicians in engineering, computing, and biology. It also serves as a valuable textbook for advanced undergraduate and graduate courses in related fields of study.

Foundations of Chemical Reaction Network Theory
Foundations of Chemical Reaction Network Theory

Author: Martin Feinberg

Publisher: Springer

Published: 2019-01-31

Total Pages: 475

ISBN-13: 3030038580

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This book provides an authoritative introduction to the rapidly growing field of chemical reaction network theory. In particular, the book presents deep and surprising theorems that relate the graphical and algebraic structure of a reaction network to qualitative properties of the intricate system of nonlinear differential equations that the network induces. Over the course of three main parts, Feinberg provides a gradual transition from a tutorial on the basics of reaction network theory, to a survey of some of its principal theorems, and, finally, to a discussion of the theory’s more technical aspects. Written with great clarity, this book will be of value to mathematicians and to mathematically-inclined biologists, chemists, physicists, and engineers who want to contribute to chemical reaction network theory or make use of its powerful results.