Estimation of Mortality Rates in Stage-Structured Population

Estimation of Mortality Rates in Stage-Structured Population

Author: Simon N. Wood

Publisher: Springer Science & Business Media

Published: 2013-03-08

Total Pages: 113

ISBN-13: 3642499791

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The stated aims of the Lecture Notes in Biomathematics allow for work that is "unfinished or tentative". This volume is offered in that spirit. The problem addressed is one of the classics of statistical ecology, the estimation of mortality rates from stage-frequency data, but in tackling it we found ourselves making use of ideas and techniques very different from those we expected to use, and in which we had no previous experience. Specifically we drifted towards consideration of some rather specific curve and surface fitting and smoothing techniques. We think we have made some progress (otherwise why publish?), but are acutely aware of the conceptual and statistical clumsiness of parts of the work. Readers with sufficient expertise to be offended should regard the monograph as a challenge to do better. The central theme in this book is a somewhat complex algorithm for mortality estimation (detailed at the end of Chapter 4). Because of its complexity, the job of implementing the method is intimidating. Any reader interested in using the methods may obtain copies of our code as follows: Intelligible Structured Code 1. Hutchinson and deHoog's algorithm for fitting smoothing splines by cross validation 2. Cubic covariant area-approximating splines 3. Cubic interpolating splines 4. Cubic area matching splines 5. Hyman's algorithm for monotonic interpolation based on cubic splines. Prototype User-Hostile Code 6. Positive constrained interpolation 7. Positive constrained area matching 8. The "full method" from chapter 4 9. The "simpler" method from chapter 4.


Management Techniques for Elasmobranch Fisheries

Management Techniques for Elasmobranch Fisheries

Author: Food and Agriculture Organization of the United Nations

Publisher: Food & Agriculture Org.

Published: 2005

Total Pages: 264

ISBN-13: 9789251054031

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Elasmobranch - describes a group of fish without a hard bony skeleton, including sharks, skates, and rays.


Sensitivity Analysis: Matrix Methods in Demography and Ecology

Sensitivity Analysis: Matrix Methods in Demography and Ecology

Author: Hal Caswell

Publisher: Springer

Published: 2019-04-02

Total Pages: 308

ISBN-13: 3030105342

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This open access book shows how to use sensitivity analysis in demography. It presents new methods for individuals, cohorts, and populations, with applications to humans, other animals, and plants. The analyses are based on matrix formulations of age-classified, stage-classified, and multistate population models. Methods are presented for linear and nonlinear, deterministic and stochastic, and time-invariant and time-varying cases. Readers will discover results on the sensitivity of statistics of longevity, life disparity, occupancy times, the net reproductive rate, and statistics of Markov chain models in demography. They will also see applications of sensitivity analysis to population growth rates, stable population structures, reproductive value, equilibria under immigration and nonlinearity, and population cycles. Individual stochasticity is a theme throughout, with a focus that goes beyond expected values to include variances in demographic outcomes. The calculations are easily and accurately implemented in matrix-oriented programming languages such as Matlab or R. Sensitivity analysis will help readers create models to predict the effect of future changes, to evaluate policy effects, and to identify possible evolutionary responses to the environment. Complete with many examples of the application, the book will be of interest to researchers and graduate students in human demography and population biology. The material will also appeal to those in mathematical biology and applied mathematics.


Stage-Structured Populations

Stage-Structured Populations

Author: Bryan Manly

Publisher: Springer Science & Business Media

Published: 2013-03-09

Total Pages: 198

ISBN-13: 9400908431

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This book provides a review of methods for obtaining and analysing data from stage-structured biological populations. The topics covered are sam pling designs (Chapter 2), the estimation of parameters by maximum likelihood (Chapter 3), the analysis of sample counts of the numbers cif individuals in different stages at different times (Chapters 4 and 5), the analysis of data using Leslie matrix types of model (Chapter 6) and key factor analysis (Chapter 7). There is also some discussion of the approaches to modelling and estimation that have been used in five studies of particular populations (Chapter 8). There is a large literature on the modelling of biological populations, and a multitude of different approaches have been used in this area. The various approaches can be classified in different ways (Southwood, 1978, ch. 12), but for the purposes of this book it is convenient to think of the three categories mathematical, statistical and predictive modelling. Mathematical modelling is concerned largely with developing models that capture the most important qualitative features of population dynamics. In this case, the models that are developed do not have to be compared with data from natural populations. As representations of idealized systems, they can be quite informative in showing the effects of changing parameters, indicating what factors are most important in promoting stability, and so on.


Wildlife Demography

Wildlife Demography

Author: John R. Skalski

Publisher: Elsevier

Published: 2010-07-20

Total Pages: 656

ISBN-13: 0080455123

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Wildlife Demography compiles the multitude of available estimation techniques based on sex and age data, and presents these varying techniques in one organized, unified volume. Designed to guide researchers to the most appropriate estimator based upon their particular data set and the desired level of study precision, this book provides quantitative consideration, statistical models, estimator variance, assumptions and examples of use. The authors focus on estimation techniques using sex and age ratios because this data is relatively easy to collect and commonly used by wildlife management. - Applicable to a wide array of wildlife species, including game and non-game birds and mammals - Features more than 100 annotated examples illustrating application of statistical methods - Includes more than 640 references of the analysis of nontagging data and the factors that may influence interpretation - Derives historical and ad hoc demographic methods in a modern statistical framework


Using Science to Improve the BLM Wild Horse and Burro Program

Using Science to Improve the BLM Wild Horse and Burro Program

Author: National Research Council

Publisher: National Academies Press

Published: 2013-10-04

Total Pages: 399

ISBN-13: 0309264944

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Using Science to Improve the BLM Wild Horse and Burro Program: A Way Forward reviews the science that underpins the Bureau of Land Management's oversight of free-ranging horses and burros on federal public lands in the western United States, concluding that constructive changes could be implemented. The Wild Horse and Burro Program has not used scientifically rigorous methods to estimate the population sizes of horses and burros, to model the effects of management actions on the animals, or to assess the availability and use of forage on rangelands. Evidence suggests that horse populations are growing by 15 to 20 percent each year, a level that is unsustainable for maintaining healthy horse populations as well as healthy ecosystems. Promising fertility-control methods are available to help limit this population growth, however. In addition, science-based methods exist for improving population estimates, predicting the effects of management practices in order to maintain genetically diverse, healthy populations, and estimating the productivity of rangelands. Greater transparency in how science-based methods are used to inform management decisions may help increase public confidence in the Wild Horse and Burro Program.


ICES Zooplankton Methodology Manual

ICES Zooplankton Methodology Manual

Author: Roger Harris

Publisher: Elsevier

Published: 2000-02-14

Total Pages: 707

ISBN-13: 0080495338

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The term "zooplankton" describes the community of floating, often microscopic, animals that inhabit aquatic environments. Being near the base of the food chain, they serve as food for larger animals, such as fish. The ICES (International Council for the Exploration of the Sea) Zooplankton Methodology Manual provides comprehensive coverage of modern techniques in zooplankton ecology written by a group of international experts. Chapters include sampling, acoustic and optical methods, estimation of feeding, growth, reproduction and metabolism, and up-to-date treatment of population genetics and modeling. This book will be a key reference work for marine scientists throughout the world. - Sampling and experimental design - Collecting zooplankton - Techniques for assessing biomass and abundance - Protozooplankton enumeration and biomass estimation - New optical and acoustic techniques for estimating zooplankton biomass and abundance - Methods for measuring zooplankton feeding, growth, reproduction and metabolism - Population genetic analysis of zooplankton - Modelling zooplankton dynamics This unique and comprehensive reference work will be essential reading for marine and freshwater research scientists and graduates entering the field.


Methods for the Study of Marine Benthos

Methods for the Study of Marine Benthos

Author: Anastasios Eleftheriou

Publisher: John Wiley & Sons

Published: 2008-04-15

Total Pages: 443

ISBN-13: 0470995114

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Ecosystems of the benthic environment are a sensitive index toecological change, and as such demand long-term and effectivemonitoring. Methods for the Study of Marine Benthos providescomprehensive information on the tools and techniques available tothose working in areas where the declining health of the sea,depletion of marine resources and the biodiversity of marine lifeare major concerns. In response to the need for increasingly detailed information onbottom-living communities, this fully revised new editionoffers: Contributions from a broad range of internationally recognisedexperts New information for those compiling environmental impactstatements, pollution assessments and working with eco-systemmanagement Two separate chapters on Imaging Techniques and DivingSystems A vital tool for all marine and environmental scientists,ecologists, fisheries workers and oceanographers, libraries in alluniversities and research establishments where these subjects arestudied and taught will find this book a valuable addition to theirshelves.


Structured-Population Models in Marine, Terrestrial, and Freshwater Systems

Structured-Population Models in Marine, Terrestrial, and Freshwater Systems

Author: Shripad Tuljapurkar

Publisher: Springer Science & Business Media

Published: 2012-12-06

Total Pages: 644

ISBN-13: 1461559731

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In the summer of 1993, twenty-six graduate and postdoctoral stu dents and fourteen lecturers converged on Cornell University for a summer school devoted to structured-population models. This school was one of a series to address concepts cutting across the traditional boundaries separating terrestrial, marine, and freshwa ter ecology. Earlier schools resulted in the books Patch Dynamics (S. A. Levin, T. M. Powell & J. H. Steele, eds., Springer-Verlag, Berlin, 1993) and Ecological Time Series (T. M. Powell & J. H. Steele, eds., Chapman and Hall, New York, 1995); a book on food webs is in preparation. Models of population structure (differences among individuals due to age, size, developmental stage, spatial location, or genotype) have an important place in studies of all three kinds of ecosystem. In choosing the participants and lecturers for the school, we se lected for diversity-biologists who knew some mathematics and mathematicians who knew some biology, field biologists sobered by encounters with messy data and theoreticians intoxicated by the elegance of the underlying mathematics, people concerned with long-term evolutionary problems and people concerned with the acute crises of conservation biology. For four weeks, these perspec tives swirled in discussions that started in the lecture hall and carried on into the sweltering Ithaca night. Diversity mayor may not increase stability, but it surely makes things interesting.