DNA barcoding: a practical tool for fundamental and applied biodiversity research

DNA barcoding: a practical tool for fundamental and applied biodiversity research

Author: Zoltan T Nagy

Publisher: PenSoft Publishers LTD

Published: 2013-12-30

Total Pages: 419

ISBN-13: 9546427101

DOWNLOAD EBOOK

DNA barcoding has become a well-accepted and popular tool for the identification of species and the detection of cryptic taxonomic diversity. As such, it has a tremendous potential for a wide variety of applications in taxonomy, agronomy, conservation biology, forensics etc. Therefore, several countries, institutions and organizations have launched DNA barcoding projects in the context of the international ?Consortium for the Barcode of Life? (CBOL) initiative. Also Belgium has done so with the establishment of the FWO research community ?Belgian Network for DNA barcoding?. In 2012, this network organized the ?Third European Conference for the Barcode of Life? (ECBOL3) in Brussels. During this event a call was made to publish a collection of papers under the thematic title ?DNA barcoding: a practical tool for fundamental and applied biodiversity research?. With the financial support of the EC project ?ViBRANT? (Virtual Biodiversity Research and Access Network for Taxonomy), 21 papers were bundled to form this special ?ZooKeys? issue with the aim to present various applications, advantages and limitations of DNA barcoding. Hence, it is the editors? hope that this issue provides a modest, but timely, contribution to the already vast literature on DNA barcoding.


DNA Barcoding in Marine Perspectives

DNA Barcoding in Marine Perspectives

Author: Subrata Trivedi

Publisher: Springer

Published: 2016-08-31

Total Pages: 325

ISBN-13: 3319418408

DOWNLOAD EBOOK

More than two third of the surface area of our planet is covered by oceans and assessment of the marine biodiversity is a challenging task. With the increasing global population, there is a tendency to exploit marine recourses for food, energy and other requirements. This puts pressure on the fragile marine environment and needs sustainable conservation efforts. Marine species identification using traditional taxonomical methods are often burdened with taxonomic controversies. Here in this book we will discuss the comparatively new concept of DNA barcoding and its significance in marine perspective. This molecular technique can be helpful in the assessment of cryptic species which are widespread in marine environment, and can also be used to link the different life cycle stages to the adult which is difficult to accomplish in marine ecosystems. Other advantages of DNA barcoding include authentication and safety assessment of seafood, wildlife forensics, conservation genetics and detection of invasive alien species (IAS). Global DNA barcoding efforts in the marine habitat include MarBOL, CeDAMar, CMarZ, SHARK-BOL, etc. DNA barcoding of different marine groups ranging from the microbes to mammals is to be revealed. In conjugation with newer and faster techniques like high throughput sequencing, DNA barcoding is serving as an effective modern tool in marine biodiversity assessment and conservation.


DNA Barcoding and Molecular Phylogeny

DNA Barcoding and Molecular Phylogeny

Author: Subrata Trivedi

Publisher: Springer Nature

Published: 2020-08-24

Total Pages: 259

ISBN-13: 3030500756

DOWNLOAD EBOOK

This book presents a comprehensive overview of DNA barcoding and molecular phylogeny, along with a number of case studies. It discusses a number of areas where DNA barcoding can be applied, such as clinical microbiology, especially in relation to infection management; DNA database management; and plant -animal interactions, and also presents valuable information on the DNA barcoding and molecular phylogeny of microbes, algae, elasmobranchs, fishes, birds and ruminant mammals. Furthermore it features unique case studies describing DNA barcoding of reptiles dwelling in Saudi Arabian deserts, genetic variation studies in both wild and hatchery populations of Anabas testudineus, DNA barcoding and molecular phylogeny of Ichthyoplankton and juvenile fishes of Kuantan River in Malaysia, and barcoding and molecular phylogenetic analysis of indigenous bacteria from fishes dwelling in a tropical tidal river. Moreover, since prompt identification and management of invasive species is vital to prevent economic and ecological loss, the book includes a chapter on DNA barcoding of invasive species. Given its scope, this book will appeal not only to researchers, teachers and students around the globe, but also to general readers.


Plant Biodiversity

Plant Biodiversity

Author: Abid A Ansari

Publisher: CABI

Published: 2016-12-23

Total Pages: 630

ISBN-13: 1780646941

DOWNLOAD EBOOK

Results of regular monitoring of the species diversity and structure of plant communities is used by conservation biologists to help understand impacts of perturbations caused by humans and other environmental factors on ecosystems worldwide. Changes in plant communities can, for example, be a reflection of increased levels of pollution, a response to long-term climate change, or the result of shifts in land-use practices by the human population. This book presents a series of essays on the application of plant biodiversity monitoring and assessment to help prevent species extinction, ecosystem collapse, and solve problems in biodiversity conservation. It has been written by a large international team of researchers and uses case studies and examples from all over the world, and from a broad range of terrestrial and aquatic ecosystems. The book is aimed at any graduate students and researchers with a strong interest in plant biodiversity monitoring and assessment, plant community ecology, biodiversity conservation, and the environmental impacts of human activities on ecosystems.


Innovations in Computational Intelligence

Innovations in Computational Intelligence

Author: Brajendra Panda

Publisher: Springer

Published: 2017-11-02

Total Pages: 309

ISBN-13: 9811045550

DOWNLOAD EBOOK

The present book includes a set of selected best papers from the 3rd International Conference on Recent Developments in Science, Engineering and Technology (REDSET 2016), held in Gurgaon, India, from 21 to 22 October 2016. The conference focused on the experimental, theoretical and application aspects of innovations in computational intelligence and provided a platform for the academicians and scientists. This book provides an insight into ongoing research and future directions in this novel, continuously evolving field. Many decades have been devoted to creating and refining methods and tools for computational intelligence such as Artificial Neural Networks, Evolutionary Computation, Fuzzy Logic, Computational Swarm Intelligence and Artificial Immune Systems. However, their applications have not yet been broadly disseminated. Computational intelligence can be used to provide solutions to many real-life problems, which could be translated into binary languages, allowing computers to process them. These problems, which involve various fields such as robotics, bioinformatics, computational biology, gene expression, cancer classification, protein function prediction, etc., could potentially be solved using computational intelligence techniques.


Environmental DNA

Environmental DNA

Author: Pierre Taberlet

Publisher: Oxford University Press

Published: 2018-02-02

Total Pages: 272

ISBN-13: 0191079995

DOWNLOAD EBOOK

Environmental DNA (eDNA) refers to DNA that can be extracted from environmental samples (such as soil, water, feces, or air) without the prior isolation of any target organism. The analysis of environmental DNA has the potential of providing high-throughput information on taxa and functional genes in a given environment, and is easily amenable to the study of both aquatic and terrestrial ecosystems. It can provide an understanding of past or present biological communities as well as their trophic relationships, and can thus offer useful insights into ecosystem functioning. There is now a rapidly-growing interest amongst biologists in applying analysis of environmental DNA to their own research. However, good practices and protocols dealing with environmental DNA are currently widely dispersed across numerous papers, with many of them presenting only preliminary results and using a diversity of methods. In this context, the principal objective of this practical handbook is to provide biologists (both students and researchers) with the scientific background necessary to assist with the understanding and implementation of best practices and analyses based on environmental DNA.


Teaching Gifted Learners in STEM Subjects

Teaching Gifted Learners in STEM Subjects

Author: Keith S. Taber

Publisher: Taylor & Francis

Published: 2017-07-31

Total Pages: 272

ISBN-13: 1317448979

DOWNLOAD EBOOK

This book offers an overview of programmes designed to support the learning of gifted and talented students in STEM subjects, both to allow them to meet their potential and to encourage them to proceed towards careers in STEM areas. The chapters from a range of national contexts report on perspectives, approaches and projects in gifted education in STEM subjects. These contributions provide a picture of the state of research and practice in this area, both to inform further research and development, and to support classroom teachers in their day-to-day work. Chapters have been written with practitioners in mind, but include relevant scholarly citations to the literature. The book includes some contributions illustrating research and practice in specific STEM areas, and others which bridge across different STEM subjects. The volume also includes an introductory theoretical chapter exploring the implications for gifted learners of how 'STEM' is understood and organized within the school curriculums.


DNA Barcodes

DNA Barcodes

Author: Ida Lopez

Publisher: Humana Press

Published: 2012-06-12

Total Pages: 470

ISBN-13: 9781617795909

DOWNLOAD EBOOK

A DNA barcode in its simplest definition is one or more short gene sequences taken from a standardized portion of the genome that is used to identify species through reference to DNA sequence libraries or databases. In DNA Barcodes: Methods and Protocols expert researchers in the field detail many of the methods which are now commonly used with DNA barcodes. These methods include the latest information on techniques for generating, applying, and analyzing DNA barcodes across the Tree of Life including animals, fungi, protists, algae, and plants. Written in the highly successful Methods in Molecular BiologyTM series format, the chapters include the kind of detailed description and implementation advice that is crucial for getting optimal results in the laboratory. Thorough and intuitive, DNA Barcodes: Methods and Protocols aids scientists in continuing to study methods from wet-lab protocols, statistical, and ecological analyses along with guides to future, large-scale collections campaigns.


Conservation of Tropical Plant Species

Conservation of Tropical Plant Species

Author: M.N. Normah

Publisher: Springer Science & Business Media

Published: 2012-08-04

Total Pages: 538

ISBN-13: 1461437768

DOWNLOAD EBOOK

The book is designed to provide a review on the methods and current status of conservation of the tropical plant species. It will also provide the information on the richness of the tropical plant diversity, the need to conserve, and the potential utilization of the genetic resources. Future perspectives of conservation of tropical species will be discussed. Besides being useful to researchers and graduate students in the field, we hope to create a reference for a much wider audience who are interested in conservation of tropical plant diversity.