DNA Barcodes
DNA Barcodes

Author: Ida Lopez

Publisher: Humana Press

Published: 2012-06-12

Total Pages: 470

ISBN-13: 9781617795909

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A DNA barcode in its simplest definition is one or more short gene sequences taken from a standardized portion of the genome that is used to identify species through reference to DNA sequence libraries or databases. In DNA Barcodes: Methods and Protocols expert researchers in the field detail many of the methods which are now commonly used with DNA barcodes. These methods include the latest information on techniques for generating, applying, and analyzing DNA barcodes across the Tree of Life including animals, fungi, protists, algae, and plants. Written in the highly successful Methods in Molecular BiologyTM series format, the chapters include the kind of detailed description and implementation advice that is crucial for getting optimal results in the laboratory. Thorough and intuitive, DNA Barcodes: Methods and Protocols aids scientists in continuing to study methods from wet-lab protocols, statistical, and ecological analyses along with guides to future, large-scale collections campaigns.

DNA Barcoding and Molecular Phylogeny
DNA Barcoding and Molecular Phylogeny

Author: Subrata Trivedi

Publisher: Springer Nature

Published: 2020-08-24

Total Pages: 259

ISBN-13: 3030500756

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This book presents a comprehensive overview of DNA barcoding and molecular phylogeny, along with a number of case studies. It discusses a number of areas where DNA barcoding can be applied, such as clinical microbiology, especially in relation to infection management; DNA database management; and plant -animal interactions, and also presents valuable information on the DNA barcoding and molecular phylogeny of microbes, algae, elasmobranchs, fishes, birds and ruminant mammals. Furthermore it features unique case studies describing DNA barcoding of reptiles dwelling in Saudi Arabian deserts, genetic variation studies in both wild and hatchery populations of Anabas testudineus, DNA barcoding and molecular phylogeny of Ichthyoplankton and juvenile fishes of Kuantan River in Malaysia, and barcoding and molecular phylogenetic analysis of indigenous bacteria from fishes dwelling in a tropical tidal river. Moreover, since prompt identification and management of invasive species is vital to prevent economic and ecological loss, the book includes a chapter on DNA barcoding of invasive species. Given its scope, this book will appeal not only to researchers, teachers and students around the globe, but also to general readers.

DNA barcoding: a practical tool for fundamental and applied biodiversity research
DNA barcoding: a practical tool for fundamental and applied biodiversity research

Author: Zoltan T Nagy

Publisher: PenSoft Publishers LTD

Published: 2013-12-30

Total Pages: 419

ISBN-13: 9546427101

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DNA barcoding has become a well-accepted and popular tool for the identification of species and the detection of cryptic taxonomic diversity. As such, it has a tremendous potential for a wide variety of applications in taxonomy, agronomy, conservation biology, forensics etc. Therefore, several countries, institutions and organizations have launched DNA barcoding projects in the context of the international ?Consortium for the Barcode of Life? (CBOL) initiative. Also Belgium has done so with the establishment of the FWO research community ?Belgian Network for DNA barcoding?. In 2012, this network organized the ?Third European Conference for the Barcode of Life? (ECBOL3) in Brussels. During this event a call was made to publish a collection of papers under the thematic title ?DNA barcoding: a practical tool for fundamental and applied biodiversity research?. With the financial support of the EC project ?ViBRANT? (Virtual Biodiversity Research and Access Network for Taxonomy), 21 papers were bundled to form this special ?ZooKeys? issue with the aim to present various applications, advantages and limitations of DNA barcoding. Hence, it is the editors? hope that this issue provides a modest, but timely, contribution to the already vast literature on DNA barcoding.

DNA Barcoding in Marine Perspectives
DNA Barcoding in Marine Perspectives

Author: Subrata Trivedi

Publisher: Springer

Published: 2016-08-31

Total Pages: 325

ISBN-13: 3319418408

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More than two third of the surface area of our planet is covered by oceans and assessment of the marine biodiversity is a challenging task. With the increasing global population, there is a tendency to exploit marine recourses for food, energy and other requirements. This puts pressure on the fragile marine environment and needs sustainable conservation efforts. Marine species identification using traditional taxonomical methods are often burdened with taxonomic controversies. Here in this book we will discuss the comparatively new concept of DNA barcoding and its significance in marine perspective. This molecular technique can be helpful in the assessment of cryptic species which are widespread in marine environment, and can also be used to link the different life cycle stages to the adult which is difficult to accomplish in marine ecosystems. Other advantages of DNA barcoding include authentication and safety assessment of seafood, wildlife forensics, conservation genetics and detection of invasive alien species (IAS). Global DNA barcoding efforts in the marine habitat include MarBOL, CeDAMar, CMarZ, SHARK-BOL, etc. DNA barcoding of different marine groups ranging from the microbes to mammals is to be revealed. In conjugation with newer and faster techniques like high throughput sequencing, DNA barcoding is serving as an effective modern tool in marine biodiversity assessment and conservation.

The Butterflies of Canada
The Butterflies of Canada

Author: Ross Layberry

Publisher: University of Toronto Press

Published: 1998-12-15

Total Pages: 360

ISBN-13: 1442655720

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Beautifully illustrated and clearly presented, The Butterflies of Canada is an indispensable guide to all aspects of butterfly study. Butterfly collecting has long been a popular summer activity, and as the growing popularity of butterfly watching and conservatories in Ontario and British Columbia shows, butterflies are a continuing source of delight and interest to Canadians. The Butterflies of Canada is the first comprehensive guide to all the butterflies found in Canada. Based on the national butterfly collection maintained by Agriculture and Agri-Food Canada, it contains descriptive individual accounts for the close to three hundred butterfly species recorded in Canada, including descriptions of early stages, subspecies, and key features that help distinguish similar species. Each species of butterfly has an individual distribution map, generated from a database of more than 90,000 location records. More than just a field guide to identifying Canadian butterflies, however, The Butterflies of Canada includes chapters on Canadian geography and butterfly distribution, conservation, gardening, photography, and the history of butterfly study in Canada. It also contains new and unpublished information on the classification of butterflies, their ranges, larval food plants, abundance, flight seasons, and noteworthy habits. Thirty two colour plates provide diagnostic details for each species, and also feature butterflies in their natural habitats. There is an extensive bibliography.

Environmental DNA
Environmental DNA

Author: Pierre Taberlet

Publisher: Oxford University Press

Published: 2018-02-02

Total Pages: 272

ISBN-13: 0191079995

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Environmental DNA (eDNA) refers to DNA that can be extracted from environmental samples (such as soil, water, feces, or air) without the prior isolation of any target organism. The analysis of environmental DNA has the potential of providing high-throughput information on taxa and functional genes in a given environment, and is easily amenable to the study of both aquatic and terrestrial ecosystems. It can provide an understanding of past or present biological communities as well as their trophic relationships, and can thus offer useful insights into ecosystem functioning. There is now a rapidly-growing interest amongst biologists in applying analysis of environmental DNA to their own research. However, good practices and protocols dealing with environmental DNA are currently widely dispersed across numerous papers, with many of them presenting only preliminary results and using a diversity of methods. In this context, the principal objective of this practical handbook is to provide biologists (both students and researchers) with the scientific background necessary to assist with the understanding and implementation of best practices and analyses based on environmental DNA.

Barcoding Nature
Barcoding Nature

Author: Claire Waterton

Publisher: Routledge

Published: 2013-07-18

Total Pages: 254

ISBN-13: 1135202389

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DNA Barcoding has been promoted since 2003 as a new, fast, digital genomics-based means of identifying natural species based on the idea that a small standard fragment of any organism’s genome (a so-called ‘micro-genome’) can faithfully identify and help to classify every species on the planet. The fear that species are becoming extinct before they have ever been known fuels barcoders, and the speed, scope, economy and ‘user-friendliness’ claimed for DNA barcoding, as part of the larger ferment around the ‘genomics revolution’, has also encouraged promises that it could inspire humanity to reverse its biodiversity-destructive habits. This book is based on six years of ethnographic research on changing practices in the identification and classification of natural species. Informed both by Science and Technology Studies (STS) and the anthropology of science, the authors analyse DNA barcoding in the context of a sense of crisis – concerning global biodiversity loss, but also the felt inadequacy of taxonomic science to address such loss. The authors chart the specific changes that this innovation is propelling in the collecting, organizing, analyzing, and archiving of biological specimens and biodiversity data. As they do so they highlight the many questions, ambiguities and contradictions that accompany the quest to create a genomics-based environmental technoscience dedicated to biodiversity protection. They ask what it might mean to recognise ambiguity, contradiction, and excess more publicly as a constitutive part of this and other genomic technosciences. Barcoding Nature will be of interest to students and scholars of sociology of science, science and technology studies, politics of the environment, genomics and post-genomics, philosophy and history of biology, and the anthropology of science.

New Horizons in Insect Science: Towards Sustainable Pest Management
New Horizons in Insect Science: Towards Sustainable Pest Management

Author: Akshay Kumar Chakravarthy

Publisher: Springer

Published: 2015-04-28

Total Pages: 432

ISBN-13: 8132220897

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Insect science is fast changing as insects are evolving to a plethora of newer chemical molecules, climate change, management tactics and transformation of the landscapes. Through the International Conference, the editors have attempted to gather together newer aspects of Insect Sciences like Insect Taxonomy, DNA Barcoding, Physiology, Toxicology, Vectors and their Management, Molecular Biology, RNA interference in Pest Management, Semiochemicals and Pest Management using Host Plant Resistance and Biological Control appropriated especially for the developing world. Both basic and applied aspects of insect science have been included to stimulate comprehensive studies on insect science. The book not only deals with insect science but also environmental and ecological aspects in the hope that the book will be of immense use to students, researchers, extension workers, planners, administrators, farmers and other end users. The Chapters on diversified aspects of Insect Science are contributed by leading scientists for the coming 21st century in which entomology is witnessing a dramatic advancement in management of pests through in-depth investigations. The dimensions of Insect Science covered in the book are pest management approaches that can be adopted worldwide with ascent on sustainability.