Chemometric Applications to a Complex Classification Problem

Chemometric Applications to a Complex Classification Problem

Author: Erin Elizabeth Waddell

Publisher:

Published: 2013

Total Pages: 298

ISBN-13:

DOWNLOAD EBOOK

Fire debris analysis currently relies on visual pattern recognition of the total ion chromatograms, extracted ion profiles, and target compound chromatograms to identify the presence of an ignitable liquid. This procedure is described in the ASTM International E1618-10 standard method. For large data sets, this methodology can be time consuming and is a subjective method, the accuracy of which is dependent upon the skill and experience of the analyst. This research aimed to develop an automated classification method for large data sets and investigated the use of the total ion spectrum (TIS). The TIS is calculated by taking an average mass spectrum across the entire chromatographic range and has been shown to contain sufficient information content for the identification of ignitable liquids. The TIS of ignitable liquids and substrates were compiled into model data sets. Substrates are defined as common building materials and household furnishings that are typically found at the scene of a fire and are, therefore, present in fire debris samples. Fire debris samples were also used which were obtained from laboratory-scale and large-scale burns. An automated classification method was developed using computational software, that was written in-house. Within this method, a multi-step classification scheme was used to detect ignitable liquid residues in fire debris samples and assign these to the classes defined in ASTM E1618-10. Classifications were made using linear discriminant analysis, quadratic discriminant analysis (QDA), and soft independent modeling of class analogy (SIMCA). The model data sets were tested by cross-validation and used to classify fire debris samples. Correct classification rates were calculated for each data set. Classifier performance metrics were also calculated for the first step of the classification scheme which included false positive rates, true positive rates, and the precision of the method. The first step, which determines a sample to be positive or negative for ignitable liquid residue, is arguably the most important in the forensic application. Overall, the highest correct classification rates were achieved using QDA for the first step of the scheme and SIMCA for the remaining steps. In the first step of the classification scheme, correct classification rates of 95.3% and 89.2% were obtained using QDA to classify the cross-validation test set and fire debris samples, respectively. For this step, the cross-validation test set resulted in a true positive rate of 96.2%, a false positive rate of 9.3%, and a precision of 98.2%. The fire debris data set had a true positive rate of 82.9%, a false positive rate of 1.3%, and a precision of 99.0%. Correct classifications rates of 100% were achieved for both data sets in the majority of the remaining steps which used SIMCA for classification. The lowest correct classification rate, 69.2%, was obtained for the fire debris samples in one of the final steps in the classification scheme. In this research, the first statistically valid error rates for fire debris analysis have been developed through cross-validation of large data sets. The fire debris analyst can use the automated method as a tool for detecting and classifying ignitable liquid residues in fire debris samples. The error rates reduce the subjectivity associated with the current methods and provide a level of confidence in sample classification that does not currently exist in forensic fire debris analysis.


Chemometrics in Practical Applications

Chemometrics in Practical Applications

Author: Kurt Varmuza

Publisher: BoD – Books on Demand

Published: 2012-03-23

Total Pages: 342

ISBN-13: 9535104381

DOWNLOAD EBOOK

In the book "Chemometrics in practical applications", various practical applications of chemometric methods in chemistry, biochemistry and chemical technology are presented, and selected chemometric methods are described in tutorial style. The book contains 14 independent chapters and is devoted to filling the gap between textbooks on multivariate data analysis and research journals on chemometrics and chemoinformatics.


Chemometrics

Chemometrics

Author: Aderval S. Luna

Publisher: Nova Science Publishers

Published: 2017

Total Pages: 245

ISBN-13: 9781536105278

DOWNLOAD EBOOK

Editor Biography: Aderval S. Luna received his Ph.D. in analytical chemistry in 2000 from Pontifical Catholic University of Rio de Janeiro. He was a fellow Ph.D. within the Chemical Metrology Group at the Institute for National Measurement Standards, National Research Council of Canada during 1999-2000. He was a postdoctoral researcher on the chemometric techniques within the Department of Analytical and Organic Chemistry at University Rovira i Virgili, Spain in 2009. He is currently Associate Professor in the Department of Analytical Chemistry at Institute of Chemistry, Rio de Janeiro State University. His interests lie in analytical chemistry comprising trace elemental analysis with a focus on atomic spectrometric detection and also dealing with pharmaceutical, biodiesel, food, and soil samples using Raman, near and mid-infrared spectroscopies coupled with chemometric tools. He has published 60 peer reviewed articles, four book chapters, a book entitled "Environmental Analytical Chemistry" in Portuguese, and serves on the advisory boards of two international analytical chemistry journals. Book Description: This book offers an accessible introduction to application-oriented multivariate methods of data analysis and procedures that are highly beneficial to solving a variety of problems by using analytical chemistry and statistics. It presents a diverse selection of topics that include experimental designs applied for the optimization of liquid chromatographic and capillary electrophoresis, variable selection in chemical data, calibration of the first order: data, algorithms, and analytical applications, characterization of polyphenols from natural products using separation techniques coupled with chemometrics, detection of malignant tumors using FT-IR spectroscopy combined with chemometrics, guidelines in synthesis of new anticancer compounds, direct analysis of solid samples by spectroscopy and chromatographic techniques, application of data fusion in different levels with examples, and analysis of pharmaceutical and food products by various analytical techniques. This book helps thereader embrace the growing role of chemometrics in some of the latest research trends, such as characterization of polyphenolic compounds in natural, pharmaceutical, and food products in analytical problems, such as classification and quantification using the multivariate calibration of the second order. This book also identifies several areas for future development and applications. The chapters are written by leading experts. Chemometrics: Methods, Applications, and New Research offers a reliable source of useful information in a style that is accessible to all levels of students, professionals, and researchers involved in analyzing scientific data.


Progress in Chemometrics Research

Progress in Chemometrics Research

Author: Alexey L. Pomerantsev

Publisher: Nova Publishers

Published: 2005

Total Pages: 342

ISBN-13: 9781594542572

DOWNLOAD EBOOK

Chemometrics is the chemical discipline that uses mathematical, statistical and other methods employing formal logic: to design or select optimal measurement procedures and experiments, and -- to provide maximum relevant chemical information by analysing chemical data. Being conceived as a branch of analytical chemistry, chemometrics now is a general approach. It extracts relevant information out of measured data, regardless of their origin: chemical, physical, biological, etc. Chemometrics has been applied in different areas, and most successfully in multivariate calibration, pattern recognition, classification and discriminant analysis, multivariate modelling, and monitoring of processes. The main chemometric principle is a concept of hidden data structures that can be found using methods of multivariate data analysis. These are the well-known statistic tools such as partial least squares (PLS), soft independent modelling of class analogy (SIMCA), principal-component regression (PCR), wavelet analysis, and many others. Current activities of chemometricians fall into two main categories: (1) development of new methods for manipulating multivariate data and (2) new applications of the known chemometric techniques in different areas such as environment control, food industry, agriculture, medicine, and engineering.


Chemometrics

Chemometrics

Author: Fabiano André Narciso Fernandes

Publisher: Elsevier

Published: 2024-06-28

Total Pages: 565

ISBN-13: 0443215030

DOWNLOAD EBOOK

Chemometrics: Data Treatment and Applications demonstrates the best practices for treating real-world analytical instrument data and how to apply chemometrics to this data. Rather than focusing on the mathematical theory involved in chemometrics, this book is meant for the industrial chemist, and academics and advanced students that want to use chemometrics in practice. Case studies on several applications are presented. Unlike existing literature, this book focuses on best practices, practical realities, and challenges when treating data, rather than on the mathematical theory. It also provides basic information on chemometrics, several chapters on how to treat, and the best practices used to treat, data from different analytical instruments, as well as case studies and uses of chemometrics in different fields. The book is written primarily for analytic chemists as practitioners in analytical laboratories and other industries. It will also be useful to academics and graduate, masters and postdoc students chiefly working in analytical chemistry who want to improve the practical aspects of their research activities. Presents topical and important chapters for the most-used analytical instruments Focuses on practical issues in the implementation of chemometrics Examines advances in the application of chemometrics in several fields Includes frank perspectives on what works well for the data of a certain analytical instrument given the multiple choices of mathematical models and protocols that can be applied Covered protocols are heavily illustrated with case studies showing their potential use and the advances in chemometrics


Chemometrics in Chromatography

Chemometrics in Chromatography

Author: Łukasz Komsta

Publisher: CRC Press

Published: 2018-02-02

Total Pages: 588

ISBN-13: 1351650440

DOWNLOAD EBOOK

Chemometrics uses advanced mathematical and statistical algorithms to provide maximum chemical information by analyzing chemical data, and obtain knowledge of chemical systems. Chemometrics significantly extends the possibilities of chromatography and with the technological advances of the personal computer and continuous development of open-source software, many laboratories are interested in incorporating chemometrics into their chromatographic methods. This book is an up-to-date reference that presents the most important information about each area of chemometrics used in chromatography, demonstrating its effective use when applied to a chromatographic separation.


Practical Guide To Chemometrics

Practical Guide To Chemometrics

Author: Paul Gemperline

Publisher: CRC Press

Published: 2006-04-16

Total Pages: 552

ISBN-13: 1420018302

DOWNLOAD EBOOK

The limited coverage of data analysis and statistics offered in most undergraduate and graduate analytical chemistry courses is usually focused on practical aspects of univariate methods. Drawing in real-world examples, Practical Guide to Chemometrics, Second Edition offers an accessible introduction to application-oriented multivariate meth


Chemometrics

Chemometrics

Author: Matthias Otto

Publisher: John Wiley & Sons

Published: 2016-09-30

Total Pages: 400

ISBN-13: 3527699368

DOWNLOAD EBOOK

The third edition of this long-selling introductory textbook and ready reference covers all pertinent topics, from basic statistics via modeling and databases right up to the latest regulatory issues. The experienced and internationally recognized author, Matthias Otto, introduces the statistical-mathematical evaluation of chemical measurements, especially analytical ones, going on to provide a modern approach to signal processing, designing and optimizing experiments, pattern recognition and classification, as well as modeling simple and nonlinear relationships. Analytical databases are equally covered as are applications of multiway analysis, artificial intelligence, fuzzy theory, neural networks, and genetic algorithms. The new edition has 10% new content to cover such recent developments as orthogonal signal correction and new data exchange formats, tree based classification and regression, independent component analysis, ensemble methods and neuro-fuzzy systems. It still retains, however, the proven features from previous editions: worked examples, questions and problems, additional information and brief explanations in the margin.


Nature-inspired Methods in Chemometrics: Genetic Algorithms and Artificial Neural Networks

Nature-inspired Methods in Chemometrics: Genetic Algorithms and Artificial Neural Networks

Author: Riccardo Leardi

Publisher: Elsevier

Published: 2003-12-03

Total Pages: 402

ISBN-13: 0080522629

DOWNLOAD EBOOK

In recent years Genetic Algorithms (GA) and Artificial Neural Networks (ANN) have progressively increased in importance amongst the techniques routinely used in chemometrics. This book contains contributions from experts in the field is divided in two sections (GA and ANN). In each part, tutorial chapters are included in which the theoretical bases of each technique are expertly (but simply) described. These are followed by application chapters in which special emphasis will be given to the advantages of the application of GA or ANN to that specific problem, compared to classical techniques, and to the risks connected with its misuse. This book is of use to all those who are using or are interested in GA and ANN. Beginners can focus their attentions on the tutorials, whilst the most advanced readers will be more interested in looking at the applications of the techniques. It is also suitable as a reference book for students. Subject matter is steadily increasing in importance Comparison of Genetic Algorithms (GA) and Artificial Neural Networks (ANN) with the classical techniques Suitable for both beginners and advanced researchers


Advances in Chemical Analysis Procedures (Part II)

Advances in Chemical Analysis Procedures (Part II)

Author: Marcello Locatelli

Publisher: MDPI

Published: 2021-01-20

Total Pages: 224

ISBN-13: 3039367862

DOWNLOAD EBOOK

In the field of Analytical Chemistry and, in particular, whenever a quali-quantitative analysis is required, until a few years ago, reference was made exclusively to instrumental methods (more or less hyphenated) which, once validated, were able to provide the answers to the questions present, even if only in a limited way to analytical targets. Nowadays, the landscape has become considerably complicated (natural adulterants, assessment of geographical origin, sophistication, need for non-destructive analysis, search for often unknown compounds), and new procedures for processing data have greatly increased the potential of analyses that are conducted (even routinely) in the laboratory. In this scenario, chemometrics is master, able to manage and process a huge amount of information based both on data relating only to the analytes of interest, but also by applying “general” procedures to process raw untargeted analysis data. It is within this strand of analysis that many of the works reported in this Special Issue fall. In the succession of works in this printed version, the criterion that guided us was to highlight how—starting exclusively from chromatographic techniques (HPLC and GC) with conventional detectors and moving to exclusively spectroscopic techniques (MS, FT-IR and Raman)—it is possible arrive at extremely powerful coupled techniques and procedures (HPLC and FT-IR) able to meet research needs. Finally, at the end of the printed volume, there are two reviews that surveying the state of the art regarding the assessment of authenticity through qualitative analyses and the application of chemometrics in the pharmaceutical field in the study of forced drug degradation products. From the succession of works (and, above all, from the various application fields) it can immediately be seen how the application of chemometrics and its procedures to both raw and processed data is a powerful means of obtaining robust, reproducible, and predictive information. In this manner, it is possible to create models able to explain and respond to the original problem in a much more detailed way. , and Honghe through Fourier transform mid infrared (FT-MIR) spectra combined with partial least squares discriminant analysis (PLS-DA), random forest (RF), and hierarchical cluster analysis (HCA) methods. Melucci and collaborators apply chemometric approaches to non-destructive analysis of ATR-FT-IR for the determination of biosilica content. This value was directly evaluated in sediment samples, without any chemical alteration, using attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy, and the quantification was performed by combining the multivariate standard addition method (MSAM) with the net analyte signal (NAS) procedure to solve the strong matrix effect of sediment samples. Still in the food and food supplements field, Anguebes-Franseschi and collaborators report an article where 10 chemometric models based on Raman spectroscopy were applied to predict the physicochemical properties of honey produced in the state of Campeche, Mexico.