Equation-free High-fidelity Algorithms for Multiscale Reactive Systems

Equation-free High-fidelity Algorithms for Multiscale Reactive Systems

Author: Ziyan Wang

Publisher:

Published: 2022

Total Pages: 0

ISBN-13:

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High-fidelity models, such as molecular dynamics, mesoscopic simulations, and pore-scale modeling, have limited applicability to scale due to their high computational costs. One common approach to rigorously transfer information from high-fidelity models to large-scale problems is through mathematical upscaling strategies to derive coarse-grained models. For fluid flow and reactive transport in porous and fractured media, effective medium theory allows one to homogenize small-scale features and to characterize the medium by macroscale properties (e.g., permeability) and equations (e.g., Darcy's law). Although this conceptualization significantly reduces the problem complexity, there are classes of physical processes that cannot be accurately upscaled by effective medium approximations, e.g., mineral precipitation and clogging during reactive transport. In this dissertation, we upscale high-fidelity pore-scale models to large-scale systems using different strategies and without relying on effective medium formulations. We first propose a patch-based algorithm, which constructs the macroscale solution based on pore-scale modeling in small sampling regions (i.e., patches), while ensuring bottom-up top-down coupling across scales. To further improve the modeling efficiency and capability, we employ deep learning in upscaling. Pore-scale simulations are still performed in small sampling regions, and neural networks are trained on the pore-scale response to describe the behaviors of small-scale features. Specifically, we consider fluid flow, reactive transport and mineral precipitation in a multiscale fracture network composed of main fractures and microcracks. A recurrent neural network is constructed to predict the feedbacks of microcracks based on the inputs from the main fractures. The deep learning model is first employed in specific benchmark scenarios; then, a general model is trained which can work under various dynamic conditions. To accurately capture mineral precipitation and clogging in more complex structures, we develop a pore-scale model for mineral precipitation coupled with fluid flow and reactive transport. The fluid-solid interface is modeled as a smooth transitional region that provides the same drag force and precipitation rate as a sharp interface. A rigorous effective viscosity model is derived to immobilize the flow and the surface reaction is modeled equivalently by a volumetric reaction, without introducing any additional parameters. Finally, we consider the altered layer formed by mineral reactions in fracture-matrix systems, which does not lend itself to effective medium representations because remarkable property variations exist in a thin rock layer. This challenge is solved by employing pore-scale modeling in the altered layer and upscaling the modeling results by deep learning. We also propose a general upscaling framework with deep learning, for any systems that have multiscale features. The framework does not rely on macroscale equations, providing a reliable and efficient solution for problems that cannot be upscaled by effective medium approximations.


Computational Optimization, Methods and Algorithms

Computational Optimization, Methods and Algorithms

Author: Slawomir Koziel

Publisher: Springer Science & Business Media

Published: 2011-06-17

Total Pages: 292

ISBN-13: 3642208584

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Computational optimization is an important paradigm with a wide range of applications. In virtually all branches of engineering and industry, we almost always try to optimize something - whether to minimize the cost and energy consumption, or to maximize profits, outputs, performance and efficiency. In many cases, this search for optimality is challenging, either because of the high computational cost of evaluating objectives and constraints, or because of the nonlinearity, multimodality, discontinuity and uncertainty of the problem functions in the real-world systems. Another complication is that most problems are often NP-hard, that is, the solution time for finding the optimum increases exponentially with the problem size. The development of efficient algorithms and specialized techniques that address these difficulties is of primary importance for contemporary engineering, science and industry. This book consists of 12 self-contained chapters, contributed from worldwide experts who are working in these exciting areas. The book strives to review and discuss the latest developments concerning optimization and modelling with a focus on methods and algorithms for computational optimization. It also covers well-chosen, real-world applications in science, engineering and industry. Main topics include derivative-free optimization, multi-objective evolutionary algorithms, surrogate-based methods, maximum simulated likelihood estimation, support vector machines, and metaheuristic algorithms. Application case studies include aerodynamic shape optimization, microwave engineering, black-box optimization, classification, economics, inventory optimization and structural optimization. This graduate level book can serve as an excellent reference for lecturers, researchers and students in computational science, engineering and industry.


Quantification of Uncertainty: Improving Efficiency and Technology

Quantification of Uncertainty: Improving Efficiency and Technology

Author: Marta D'Elia

Publisher: Springer Nature

Published: 2020-07-30

Total Pages: 290

ISBN-13: 3030487210

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This book explores four guiding themes – reduced order modelling, high dimensional problems, efficient algorithms, and applications – by reviewing recent algorithmic and mathematical advances and the development of new research directions for uncertainty quantification in the context of partial differential equations with random inputs. Highlighting the most promising approaches for (near-) future improvements in the way uncertainty quantification problems in the partial differential equation setting are solved, and gathering contributions by leading international experts, the book’s content will impact the scientific, engineering, financial, economic, environmental, social, and commercial sectors.


Bayesian Optimization

Bayesian Optimization

Author: Roman Garnett

Publisher: Cambridge University Press

Published: 2023-01-31

Total Pages: 376

ISBN-13: 1108623557

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Bayesian optimization is a methodology for optimizing expensive objective functions that has proven success in the sciences, engineering, and beyond. This timely text provides a self-contained and comprehensive introduction to the subject, starting from scratch and carefully developing all the key ideas along the way. This bottom-up approach illuminates unifying themes in the design of Bayesian optimization algorithms and builds a solid theoretical foundation for approaching novel situations. The core of the book is divided into three main parts, covering theoretical and practical aspects of Gaussian process modeling, the Bayesian approach to sequential decision making, and the realization and computation of practical and effective optimization policies. Following this foundational material, the book provides an overview of theoretical convergence results, a survey of notable extensions, a comprehensive history of Bayesian optimization, and an extensive annotated bibliography of applications.


Optimization and Computational Fluid Dynamics

Optimization and Computational Fluid Dynamics

Author: Dominique Thévenin

Publisher: Springer Science & Business Media

Published: 2008-01-08

Total Pages: 301

ISBN-13: 3540721533

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The numerical optimization of practical applications has been an issue of major importance for the last 10 years. It allows us to explore reliable non-trivial configurations, differing widely from all known solutions. The purpose of this book is to introduce the state-of-the-art concerning this issue and many complementary applications are presented.


Simulation-Driven Modeling and Optimization

Simulation-Driven Modeling and Optimization

Author: Slawomir Koziel

Publisher: Springer

Published: 2016-02-12

Total Pages: 405

ISBN-13: 3319275178

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This edited volume is devoted to the now-ubiquitous use of computational models across most disciplines of engineering and science, led by a trio of world-renowned researchers in the field. Focused on recent advances of modeling and optimization techniques aimed at handling computationally-expensive engineering problems involving simulation models, this book will be an invaluable resource for specialists (engineers, researchers, graduate students) working in areas as diverse as electrical engineering, mechanical and structural engineering, civil engineering, industrial engineering, hydrodynamics, aerospace engineering, microwave and antenna engineering, ocean science and climate modeling, and the automotive industry, where design processes are heavily based on CPU-heavy computer simulations. Various techniques, such as knowledge-based optimization, adjoint sensitivity techniques, and fast replacement models (to name just a few) are explored in-depth along with an array of the latest techniques to optimize the efficiency of the simulation-driven design process. High-fidelity simulation models allow for accurate evaluations of the devices and systems, which is critical in the design process, especially to avoid costly prototyping stages. Despite this and other advantages, the use of simulation tools in the design process is quite challenging due to associated high computational cost. The steady increase of available computational resources does not always translate into the shortening of the design cycle because of the growing demand for higher accuracy and necessity to simulate larger and more complex systems. For this reason, automated simulation-driven design—while highly desirable—is difficult when using conventional numerical optimization routines which normally require a large number of system simulations, each one already expensive.


TEXTBOOK OF COMPUTER AIDED DRUG DEVELOPMENT

TEXTBOOK OF COMPUTER AIDED DRUG DEVELOPMENT

Author: Prof. (Dr.) Keerthi. G. S. Nair

Publisher: Shashwat Publication

Published: 2024-08-07

Total Pages: 308

ISBN-13: 9360874833

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This book delves into the utilization of computer-assisted techniques in the exploration, design, optimization, and production of novel pharmaceutical formulations and drug delivery systems, with a focus on their efficacy and safety. It covers computational methods, statistical and molecular modeling, all aimed at facilitating the development and safe administration of drugs in humans. The integration of Quality by Design (QbD), Design of Experiments (DoE), artificial intelligence, and in silico pharmacokinetic assessment/simulation is greatly facilitated by commercial software and expert systems, all of which are thoroughly examined in this title, accompanied by examples drawn from recent research. "Computer-aided Pharmaceutics and Drug Delivery" serves as a comprehensive reference for the latest scholarly updates on emerging developments in computer-assisted techniques for drug design and development. It is tailored for pharmacists, medical practitioners, students, and researchers seeking authoritative insights into this evolving field.