The Hologenome Concept: Human, Animal and Plant Microbiota

The Hologenome Concept: Human, Animal and Plant Microbiota

Author: Eugene Rosenberg

Publisher: Springer Science & Business Media

Published: 2014-01-31

Total Pages: 187

ISBN-13: 3319042416

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Groundbreaking research over the last 10 years has given rise to the hologenome concept of evolution. This concept posits that the holobiont (host plus all of its associated microorganisms) and its hologenome (sum of the genetic information of the host and its symbiotic microorganisms), acting in concert, function as a unique biological entity and therefore as a level of selection in evolution. All animals and plants harbor abundant and diverse microbiota, including viruses. Often the amount of symbiotic microorganisms and their combined genetic information far exceed that of their host. The microbiota with its microbiome, together with the host genome, can be transmitted from one generation to the next and thus propagate the unique properties of the holobiont. The microbial symbionts and the host interact in a cooperative way that affects the health of the holobiont within its environment. Beneficial microbiota protects against pathogens, provides essential nutrients, catabolizes complex polysaccharides, renders harmful chemicals inert, and contributes to the performance of the immune system. In humans and animals, the microbiota also plays a role in behavior. The sum of these cooperative interactions characterizes the holobiont as a unique biological entity. Genetic variation in the hologenome can be brought about by changes in either the host genome or the microbial population genomes (microbiome). Evolution by cooperation can occur by amplifying existing microbes, gaining novel microbiota and by acquiring microbial and viral genes. Under environmental stress, the microbiome can change more rapidly and in response to more processes than the host organism alone and thus influences the evolution of the holobiont. Prebiotics, probiotics, synbiotics and phage therapy are discussed as applied aspects of the hologenome concept.


Microbiomes

Microbiomes

Author: Eugene Rosenberg

Publisher: Springer Nature

Published: 2021-03-02

Total Pages: 439

ISBN-13: 303065317X

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This book examines an important paradigm shift in biology: Plants and animals, traditionally viewed as individuals, are now considered to be complex systems and host to a plethora of microorganisms. After first presenting historical aspects of microbiota research, bacterial compositions of individual microbiomes and the critical analysis of current methods, the book discusses how microbial communities inside the human body are profoundly affected by numerous factors, such as macro- and micro-nutrients, physical exercise, antibiotics, gender and age. As described by current research, the author highlights how microbiomes contribute to the fitness of the host by providing nutrients, inhibiting pathogens, aiding in the storage of fat during pregnancy, and contributing to development and behavior. The author not only focusses on prokaryotic components in microbiomes, but also addresses single-cell eukaryotes and viruses. This follow-up to the successful book The Hologenome Concept: Human, Animal and Plant Microbiota, published in 2013, provides a contemporary overview of microbiomes. It appeals to anyone working in the life sciences and biomedicine.


Organisms Amplify Diversity

Organisms Amplify Diversity

Author: David Seaborg

Publisher: CRC Press

Published: 2023-06-30

Total Pages: 557

ISBN-13: 1000826384

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This book presents a hypothesis and evidence that organisms promote and ecosystems maximize biodiversity. All species have a net positive effect on their environment, other species, and diversity. The sun is 30% hotter than when life began, but the temperature has been kept moderate by life. Life created high oxygen, the ozone layer, and fertile soil, a diverse, living system. No species evolves in isolation, and most evolution is coevolution. The nature and number of links between species are as important as species number. Eukaryotes coevolve with complex ecosystems of microbes with which they exchange genes. Genomes and intraspecific interactions both act to promote evolution and diversification. Viruses increase diversity of their hosts and cause macroevolutionary transitions. Key Features Life alters the Earth in ways that increase biodiversity All species make their environment better for other species and promote diversity Life created the life-friendly atmosphere, temperature, and soil of today


Evolution in Action: Past, Present and Future

Evolution in Action: Past, Present and Future

Author: Wolfgang Banzhaf

Publisher: Springer Nature

Published: 2020-07-08

Total Pages: 607

ISBN-13: 3030398315

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This edited research monograph brings together contributions from computer scientists, biologists, and engineers who are engaged with the study of evolution and how it may be applied to solve real-world problems. It also serves as a Festschrift dedicated to Erik D. Goodman, the founding director of the BEACON Center for the Study of Evolution in Action, a pioneering NSF Science and Technology Center headquartered at Michigan State University. The contributing authors are leading experts associated with the center, and they serve in top research and industrial establishments across the US and worldwide. Part I summarizes the history of the BEACON Center, with refreshingly personal chapters that describe Erik's working and leadership style, and others that discuss the development and successes of the center in the context of research funding, projects, and careers. The chapters in Part II deal with the evolution of genomes and evolvability. The contributions in Part III discuss the evolution of behavior and intelligence. Those in Part IV concentrate on the evolution of communities and collective dynamics. The chapters in Part V discuss selected evolutionary computing applications in domains such as arts and science, automated program repair, cybersecurity, mechatronics, and genomic prediction. Part VI deals with evolution in the classroom, using creativity in research, and responsible conduct in research training. The book concludes with a special chapter from Erik Goodman, a short biography that concentrates on his personal positive influences and experiences throughout his long career in academia and industry.


The Plant Microbiome in Sustainable Agriculture

The Plant Microbiome in Sustainable Agriculture

Author: Alok Kumar Srivastava

Publisher: John Wiley & Sons

Published: 2021-02-16

Total Pages: 320

ISBN-13: 111950516X

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The most up-to-date reference on phytomicrobiomes available today The Plant Microbiome in Sustainable Agriculture combines the most relevant and timely information available today in the fields of nutrient and food security. With a particular emphasis on current research progress and perspectives of future development in the area, The Plant Microbiome in Sustainable Agriculture is an invaluable reference for students and researchers in the field, as well as those with an interest in microbiome research and development. The book covers both terrestrial and crop associated microbiomes, unveiling the biological, biotechnological and technical aspects of research. Topics discussed include: Developing model plant microbiome systems for various agriculturally important crops Defining core microbiomes and metagenomes in these model systems Defining synthetic microbiomes for a sustainable increase in food production and quality The Plant Microbiome in Sustainable Agriculture is written to allow a relative neophyte to learn and understand the basic concepts involved in phytomicrobiomes and discuss them intelligently with colleagues.


Symbiosis as a Source of Evolutionary Innovation

Symbiosis as a Source of Evolutionary Innovation

Author: Lynn Margulis

Publisher: MIT Press

Published: 1991

Total Pages: 482

ISBN-13: 9780262132695

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These original contributions by symbiosis biologists and evolutionary theorists address the adequacy of the prevailing neo-Darwinian concept of evolution in the light of growing evidence that hereditary symbiosis, supplemented by the gradual accumulation of heritable mutation, results in the origin of new species and morphological novelty.A departure from mainstream biology, the idea of symbiosis--as in the genetic and metabolic interactions of the bacterial communities that became the earliest eukaryotes and eventually evolved into plants and animals--has attracted the attention of a growing number of scientists.These original contributions by symbiosis biologists and evolutionary theorists address the adequacy of the prevailing neo-Darwinian concept of evolution in the light of growing evidence that hereditary symbiosis, supplemented by the gradual accumulation of heritable mutation, results in the origin of new species and morphological novelty. They include reports of current research on the evolutionary consequences of symbiosis, the protracted physical association between organisms of different species. Among the issues considered are individuality and evolution, microbial symbioses, animal-bacterial symbioses, and the importance of symbiosis in cell evolution, ecology, and morphogenesis. Lynn Margulis, Distinguished Professor of Botany at the University of Massachusetts at Amherst, is the modern originator of the symbiotic theory of cell evolution. Once considered heresy, her ideas are now part of the microbiological revolution. ContributorsPeter Atsatt, Richard C. Back, David Bermudes, Paola Bonfante-Fasolo, René Fester, Lynda J. Goff, Anne-Marie Grenier, Ricardo Guerrero, Robert H. Haynes, Rosmarie Honegger, Gregory Hinkle, Kwang W. Jeon, Bryce Kendrick, Richard Law, David Lewis, Lynn Margulis, John Maynard Smith, Margaret J. McFall-Ngai, Paul Nardon, Kenneth H. Nealson, Kris Pirozynski, Peter W. Price, Mary Beth Saffo, Jan Sapp, Silvano Scannerini, Werner Schwemmler, Sorin Sonea, Toomas H. Tiivel, Robert K. Trench, Russell Vetter


Author:

Publisher: Éditions Épistémé

Published:

Total Pages: 238

ISBN-13: 2832322662

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Edinburgh Companion to Animal Studies

Edinburgh Companion to Animal Studies

Author: Lynn Turner

Publisher: Edinburgh University Press

Published: 2018-03-07

Total Pages: 559

ISBN-13: 1474418422

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This volume critically investigates current topics and disciplines that are affected, enriched or put into dispute by the burgeoning scholarship on Animal Studies.


The Art of Being Posthuman

The Art of Being Posthuman

Author: Francesca Ferrando

Publisher: John Wiley & Sons

Published: 2023-11-28

Total Pages: 164

ISBN-13: 1509548971

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This book offers a comprehensive reflection on the existential condition of the 21st century. A visionary introduction to existential posthumanism, it takes the form of eight meditations. This posthuman journey of self-inquiry engages with a wide range of knowledge and wisdom: from the Paleolithic times to the futures of radical life extension, from multi-species evolutions to the rights of Nature, the Anthropocene and the rise of Artificial Intelligence. The book declutters the habit of being human. Letting go of the need for anthropocentric mastery and species-specific ambitions, the reader emerges regenerated. The manifold paths of posthuman self-realization reveal that we are all co-creators in the existential unfolding: our lives are our ultimate works of art. The Art of Being Posthuman is a self-help guide to navigate our brave new world. You can listen to Dr. Ferrando talk about the book’s key themes in these videos: 1. Introduction and 2. Conclusion