Multistate Occupancy Modeling Improves Understanding of Amphibian Breeding Dynamics in the Greater Yellowstone Area

Multistate Occupancy Modeling Improves Understanding of Amphibian Breeding Dynamics in the Greater Yellowstone Area

Author: William R. Gould

Publisher:

Published: 2018

Total Pages: 46

ISBN-13:

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Discerning the determinants of species occurrence across landscapes is fundamental to their conservation and management. In spatially and climatologically complex landscapes, explaining the dynamics of occurrence can lead to improved understanding of short versus long-term trends and offer novel insight on local versus regional change. We examined the changes in occupancy two species of anurans with different life histories over a decade using hundreds of wetland sites in Yellowstone and Grand Teton national parks. To account for the joint dynamics of wetland drying and amphibian breeding, we adopted a multistate occupancy model as a means to investigate mechanistic relationship of observed occurrence patterns with climatological drivers of wetland hydrologic variability. This approach allowed us to decompose occupancy dynamics into habitat changes caused by wetland drying and amphibian breeding activity, conditional on available water and previous breeding state. Over our 10-year time series, we observed considerable variability in climate drivers and the proportion of dry wetlands. Boreal Chorus Frogs (Pseudacris maculata) were more responsive to changes in wetland inundation status than Columbia Spotted Frogs (Rana luteiventris) as indicated by higher breeding colonization probabilities under favorable (wet) conditions. Both species had high probabilities of breeding persistence in permanently inundated wetlands with prior breeding. Despite the absence of multi-year drought in our time series, mechanistic relationships described here offer insights on how future climate variation may result in reduced and/or shifted occurrence patterns for pond-breeding anurans in the Greater Yellowstone Area. Further, our modeling approach may prove valuable in evaluating determinants of occurrence for other species that are dependent on wetlands or other dynamic habitats.


Estimating Occupancy in Large Landscapes

Estimating Occupancy in Large Landscapes

Author: William R. Gould

Publisher:

Published: 2012

Total Pages: 11

ISBN-13:

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Monitoring of natural resources is crucial to ecosystem conservation, and yet it can pose many challenges. Annual surveys for amphibian breeding occupancy were conducted in Yellowstone and Grand Teton National Parks over a 4-year period (2006?2009) at two scales: catchments (portions of watersheds) and individual wetland sites. Catchments were selected in a stratified random sample with habitat quality and ease of access serving as strata. All known wetland sites with suitable habitat were surveyed within selected catchments. Changes in breeding occurrence of tiger salamanders, boreal chorus frogs, and Columbia-spotted frogs were assessed using multi-season occupancy estimation. Numerous a priori models were considered within an information theoretic framework including those with catchment and site-level covariates. Habitat quality was the most important predictor of occupancy. Boreal chorus frogs demonstrated the greatest increase in breeding occupancy at the catchment level. Larger changes for all 3 species were detected at the finer site-level scale. Connectivity of sites explained occupancy rates more than other covariates, and may improve understanding of the dynamic processes occurring among wetlands within this ecosystem. Our results suggest monitoring occupancy at two spatial scales within large study areas is feasible and informative.


Estimating Presence and Abundance of Closed Populations

Estimating Presence and Abundance of Closed Populations

Author: George A. F. Seber

Publisher: Springer Nature

Published: 2024-01-02

Total Pages: 734

ISBN-13: 3031398343

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This comprehensive book covers a wide variety of methods for estimating the sizes and related parameters of closed populations. With the effect of climate change, and human territory invasion, we have seen huge species losses and a major biodiversity decline. Populations include plants, trees, various land and sea animals, and some human populations. With such a diversity of populations, an extensive variety of different methods are described with the collection of different types of data. For example, we have count data from plot sampling, which can also allow for incomplete detection. There is a large chapter on occupancy methods where a major interest is determining whether a particular species is present or not. Citizen and opportunistic survey data can also be incorporated. A related topic is species methods, where species richness and species' interactions are of interest. A variety of distance methods are discussed. One can use distances from points and lines, as well as nearest neighbor distances. The applications are extensive, and include marine, acoustic, and aerial surveys, using multiple observers or detection devices. Line intercept measurements have a role to play such as, for example, estimating parameters relating to plant coverage. An increasingly important class of removal methods considers successive “removals" from a population, with physical removal or "removal" by capture-recapture of marked individuals. With the change-in-ratio method, removals are taken from two or more classes, e.g., males and females. Effort data used for removals can also be used. A very important method for estimating abundance is the use of capture-recapture data collected discretely or continuously and can be analysed using both frequency and Bayesian methods. Computational aspects of fitting Bayesian models are described. A related topic of growing interest is the use of spatial and camera methods. With the plethora of models there has been a corresponding development of various computational methods and packages, which are often mentioned throughout. Covariate data is being used more frequently, which can reduce the number of unknown parameters by using logistic and loglinear models. An important computational aspect is that of model selection methods. The book provides a useful list of over 1400 references.


Predicting Breeding Habitat for Amphibians: a Spatiotemporal Analysis Across Yellowstone National Park

Predicting Breeding Habitat for Amphibians: a Spatiotemporal Analysis Across Yellowstone National Park

Author: Paul E. Bartelt

Publisher:

Published: 2011

Total Pages: 18

ISBN-13:

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The ability to predict amphibian breeding across landscapes is important for informing land management decisions and helping biologists better understand and remediate factors contributing to declines in amphibian populations. We built geospatial models of likely breeding habitats for each of four amphibian species that breed in Yellowstone National Park (YNP). We used field data collected in 2000?2002 from 497 sites among 16 basins and predictor variables from geospatial models produced from remotely sensed data (e.g., digital elevation model, complex topographic index, landform data, wetland probability, and vegetative cover). Except for 31 sites in one basin that were surveyed in both 2000 and 2002, all sites were surveyed once. We used polytomous regression to build statistical models for each species of amphibian from (1) field survey site data only, (2) field data combined with data from geospatial models, and (3) data from geospatial models only. Based on measures of receiver operating characteristic (ROC) scores, models of the second type best explained likely breeding habitat because they contained the most information (ROC values ranged from 0.70 to 0.88). However, models of the third type could be applied to the entire YNP landscape and produced maps that could be verified with reserve field data. Accuracy rates for models built for single years were highly variable, ranging from 0.30 to 0.78. Accuracy rates for models built with data combined from multiple years were higher and less variable, ranging from 0.60 to 0.80. Combining results from the geospatial multiyear models yielded maps of ?core? breeding areas (areas with high probability values for all three years) surrounded by areas that scored high for only one or two years, providing an estimate of variability among years. Such information can highlight landscape options for amphibian conservation. For example, our models identify alternative areas that could be protected for each species, including 6828?10 764 ha for tiger salamanders, 971?3017 ha for western toads, 4732?16 696 ha for boreal chorus frogs, and 4940?19 690 ha for Columbia spotted frogs.


Frogs of the United States and Canada

Frogs of the United States and Canada

Author: C. Kenneth Dodd Jr.

Publisher: JHU Press

Published: 2023-06-20

Total Pages: 991

ISBN-13: 1421444925

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The most thorough, updated guide to frogs and toads in the United States and Canada available. A stunning diversity of frog species can be found from coastal swamps to lofty mountain peaks, and from the Florida Keys to the Arctic Ocean. They live in subtropical lowlands, grassland prairies, deserts, and alpine-tundra habitats. Some species have restricted habitat requirements, whereas others occur contiguously from the arid plains or humid southeastern forests to the high tundra. In this new edition of Frogs of the United States and Canada, C. Kenneth Dodd Jr. tours the reader through the marvelous world of North American frogs. Covering 114 native and introduced species from all US states and Canadian provinces, this comprehensive reference on the biology, behavior, and conservation of the Order Anura includes detailed and updated information on • past and present distribution • life history and demography • reproduction and diet • landscape ecology and evolution • diseases, parasites, and threats from toxic substances • conservation and management Hundreds of occurrence maps, line drawings, and new color photographs of frogs and their habitats enhance the text. The most thorough treatment of the life histories, distribution, and status of North American frogs ever produced, Frogs of the United States and Canada has been the go-to reference for naturalists, scientists, and resource managers in their efforts to understand and conserve frogs, their habitats, and biodiversity for over a decade. Based on a meticulously updated examination of more than 8,000 references current through 2021, this second edition ensures Dodd's master work will remain an unparalleled resource for years to come.


Species-specific Responses to Wetland Mitigation Among Amphibians in the Greater Yellowstone Ecosystem

Species-specific Responses to Wetland Mitigation Among Amphibians in the Greater Yellowstone Ecosystem

Author: Leah K. Swartz

Publisher:

Published: 2019

Total Pages: 36

ISBN-13:

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Habitat loss and degradation are leading causes of biodiversity declines, therefore assessing the capacity of created mitigation wetlands to replace habitat for wildlife has become a management priority. We used single season occupancy models to compare occurrence of larvae of four species of pond-breeding amphibians in wetlands created for mitigation, wetlands impacted by road construction, and unimpacted reference wetlands along a highway corridor in the Greater Yellowstone Ecosystem, U.S.A. Created wetlands were shallow and had less aquatic vegetation and surface area than impacted and reference wetlands. Occupancy of barred tiger salamander (Ambystoma mavortium) and boreal chorus frog (Pseudacris maculata) larvae was similar across wetland types, whereas boreal toads (Anaxyrus boreas) occurred more often in created wetlands than reference and impacted wetlands. However, the majority of created wetlands (> 80%) dried partially or completely before amphibian metamorphosis occurred in both years of our study, resulting in heavy mortality of larvae and, we suspect, little to no recruitment. Columbia spotted frogs (Rana luteiventris), which require emergent vegetation that is not common in newlycreated wetlands, occurred commonly in impacted and reference wetlands but were found in only one created wetland. Our results show that shallow created wetlands with little aquatic vegetation may be attractive breeding areas for some amphibians, but may result in high mortality and little recruitment if they fail to hold water for the entire larval period.


Wildlife Disease Ecology

Wildlife Disease Ecology

Author: Kenneth Wilson

Publisher: Cambridge University Press

Published: 2019-11-14

Total Pages: 693

ISBN-13: 1107136563

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Introduces readers to key case studies that illustrate how theory and data can be integrated to understand wildlife disease ecology.


Frogs of the United States and Canada

Frogs of the United States and Canada

Author: C. Kenneth Dodd Jr.

Publisher: JHU Press

Published: 2023-06-20

Total Pages: 991

ISBN-13: 1421444917

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"The premiere reference book on the 108 species of frogs inhabiting North America north of Mexico. An unparalleled synthesis of the biology and behavior of all native and nonindigenous species, this two-volume, extensively referenced resource has been called the most important book ever published on North American anura. Color photographs and range maps accompany species accounts detailing information on etymology, nomenclature, identification, distribution, fossil record, systematics and geographic variation, life history and ecology, behavior, population and community biology, and conservation. This new edition of the text contains the following updates: Literature citations have been added from 2012 to 2021, now spanning from 1709 to 2021. Distribution maps have been updated, recording the decreased ranges due to declining amphibian populations. Photographs have been revised to ensure the highest digital quality. Anaxyrus williamsi and Lithobates kauffeldi, newly described species, have been included. An account is also included for Gastrophryne mazatlanensis, now recognized as occurring within the United States. Generic keys have been added. A brief section on N.A. frogs in history and art have been added. Nomenclature has been updated (Incilius for Ollotis). Now the only up-to-date and comprehensive resource for those trying to protect amphibians in the US and Canada, as well as for researchers and wildlife managers who study biodiversity"--


Statistical Ecology

Statistical Ecology

Author: Linda J. Young

Publisher: Springer Science & Business Media

Published: 2013-04-17

Total Pages: 581

ISBN-13: 1475728298

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Covering a wide range of disciplines, this book explains the formulae, techniques, and methods used in field ecology. By providing an awareness of the statistical foundation for existing methods, the book will make biologists more aware of the strengths and possible weaknesses of procedures employed, and statisticians more appreciative of the needs of the field ecologist. Unique to this book is a focus on ecological data for single-species populations, from sampling through modeling. Examples come from real situations in pest management, forestry, wildlife biology, plant protection, and environmental studies, as well as from classical ecology. All those using this book will acquire a strong foundation in the statistical methods of modern ecological research. This textbook is for late undergraduate and graduate students, and for professionals.