MRI Fat Quantification a Phase Sweep B-SSFP Approach

MRI Fat Quantification a Phase Sweep B-SSFP Approach

Author: Sarah Larmour

Publisher:

Published: 2015

Total Pages: 93

ISBN-13:

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Fats are a fundamental building block of the human body, but accumulation of unwanted fat in and around tissues is a common pathology related to many disease mechanisms. Magnetic Resonance Imaging (MRI) offers a host of methods to differentiate water and fat signals in images or spectra, for both high fat content visceral and adipose fat, and the lower concentration intra-cellular fat pools. Accurate quantitative measurements of small fat concentrations and small changes in fat concentration within the heart and liver would enable the early detection of disease, evaluation of disease progression, and assessment of the effectiveness of prescribed treatments. Current methods, such as Dixon fat-water methods, have poor performance at low fat-fraction (FF), while 1H Nuclear Magnetic Resonance (NMR) spectroscopy methods are difficult to apply in the heart, and are not widely available. The goals of this thesis were primarily to develop and validate a new method called Phase Sweep b-SSFP for the simultaneous quantification of FF, water T1 and T2, and off-resonance frequency using multiple b-SSFP images with incremented radio frequency (RF) pulse phase (Phase Sweep b-SSFP), and secondly to characterize the effects of fat on commonly used T1 mapping sequences and evaluate a new method for quantitative FF imaging, based on the modulation of T1 values by the fat pool. For the purpose of validation of these methods, the proposed work on fat quantification addressed accuracy and precision for the case of small concentrations of fat in the 0 - 10% range. Methods included numerical simulations, phantom experiments and application in skeletal muscle for validation. This range reflects the intended future clinical application of the techniques in the heart, kidney and liver to provide early diagnosis of disease and assessment of prescribed treatment effectiveness. Skeletal muscle provides a good surrogate for the diffuse and heterogeneous fat deposits found in the heart, kidney and liver while allowing us to develop methods without the added complication of excessive movement and need for free breathing pulse sequences. The results of this work show that 1) by using the proposed Phase Sweep b-SSFP method it is feasible to acquire quantitative results for FF, water T1 and T2 and off-resonance frequency, for which the variability in each parameter is largely independent of all other parameters and 2) low FF in tissues result in relatively large negative or positive shifts in native tissue T1 measured with MOLLI and SASHA T1 mapping methods as a function of off-resonance frequency, and that these resulting T1 shifts can be used to accurately quantify FF.


Development of Magnetic Resonance Imaging (MRI) Methods for in Vivo Quantification of Lipids in Preclinical Models

Development of Magnetic Resonance Imaging (MRI) Methods for in Vivo Quantification of Lipids in Preclinical Models

Author: Roberto Salvati

Publisher:

Published: 2015

Total Pages: 0

ISBN-13:

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Obesity is associated with increased morbidity and mortality linked to many diseases, including type 2 diabetes, hypertension and disease nonalcoholic fatty liver. Recently, 1H magnetic resonance imaging (MRI) has emerged as the method of choice for non-invasive fat quantification. In this thesis, MRI methodologies were investigated for in vitro (MR phantoms) and in vivo (mice) measurements on a 4.7T preclinical scanner. Two algorithms of fat quantifications - the Dixon's method and IDEAL algorithm - were considered. The performances of the IDEAL algorithm were analyzed as a function of tissue properties (T2*, fat fraction and fat spectral model), MRI acquisition parameters (echo times, number of echoes) and experimental parameters (SNR and field map). In phantoms, the standard approach of single-T2* IDEAL showed some limitations that could be overcome by optimizing the number of echoes. A novel method to determine the ground truth values of T2* of water and T2* of fat was here proposed. For in vivo measurements, different analyses were performed using the IDEAL algorithm in liver and muscle. Statistical analysis on ROI measurements showed that the optimal choice of the number of echoes was equal to three for fat quantification and six or more for T2* quantification. The fat fraction values, calculated with IDEAL algorithm, were statistically similar to the values obtained with Dixon's method. Finally, a method for generating reference signals mimicking fat-water systems (Fat Virtual Phantom MRI), without using physical objects, was proposed. These virtual phantoms, which display realistic noise characteristics, represent an attractive alternative to physical phantoms for providing a reference signal in MRI measurements.


MRI from Picture to Proton

MRI from Picture to Proton

Author: Donald W. McRobbie

Publisher: Cambridge University Press

Published: 2017-04-13

Total Pages: 405

ISBN-13: 1316688259

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MR is a powerful modality. At its most advanced, it can be used not just to image anatomy and pathology, but to investigate organ function, to probe in vivo chemistry, and even to visualise the brain thinking. However, clinicians, technologists and scientists struggle with the study of the subject. The result is sometimes an obscurity of understanding, or a dilution of scientific truth, resulting in misconceptions. This is why MRI from Picture to Proton has achieved its reputation for practical clarity. MR is introduced as a tool, with coverage starting from the images, equipment and scanning protocols and traced back towards the underlying physics theory. With new content on quantitative MRI, MR safety, multi-band excitation, Dixon imaging, MR elastography and advanced pulse sequences, and with additional supportive materials available on the book's website, this new edition is completely revised and updated to reflect the best use of modern MR technology.


The Physics and Mathematics of MRI

The Physics and Mathematics of MRI

Author: Richard Ansorge

Publisher: Morgan & Claypool Publishers

Published: 2016-11-01

Total Pages: 188

ISBN-13: 1681740680

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Magnetic Resonance Imaging is a very important clinical imaging tool. It combines different fields of physics and engineering in a uniquely complex way. MRI is also surprisingly versatile, 'pulse sequences' can be designed to yield many different types of contrast. This versatility is unique to MRI. This short book gives both an in depth account of the methods used for the operation and construction of modern MRI systems and also the principles of sequence design and many examples of applications. An important additional feature of this book is the detailed discussion of the mathematical principles used in building optimal MRI systems and for sequence design. The mathematical discussion is very suitable for undergraduates attending medical physics courses. It is also more complete than usually found in alternative books for physical scientists or more clinically orientated works.


Introduction to Functional Magnetic Resonance Imaging

Introduction to Functional Magnetic Resonance Imaging

Author: Richard B. Buxton

Publisher: Cambridge University Press

Published: 2009-08-27

Total Pages: 479

ISBN-13: 1139481304

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Functional Magnetic Resonance Imaging (fMRI) has become a standard tool for mapping the working brain's activation patterns, both in health and in disease. It is an interdisciplinary field and crosses the borders of neuroscience, psychology, psychiatry, radiology, mathematics, physics and engineering. Developments in techniques, procedures and our understanding of this field are expanding rapidly. In this second edition of Introduction to Functional Magnetic Resonance Imaging, Richard Buxton – a leading authority on fMRI – provides an invaluable guide to how fMRI works, from introducing the basic ideas and principles to the underlying physics and physiology. He covers the relationship between fMRI and other imaging techniques and includes a guide to the statistical analysis of fMRI data. This book will be useful both to the experienced radiographer, and the clinician or researcher with no previous knowledge of the technology.


Magnetic Resonance Imaging

Magnetic Resonance Imaging

Author: Robert W. Brown

Publisher: John Wiley & Sons

Published: 2014-06-23

Total Pages: 976

ISBN-13: 0471720852

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New edition explores contemporary MRI principles and practices Thoroughly revised, updated and expanded, the second edition of Magnetic Resonance Imaging: Physical Principles and Sequence Design remains the preeminent text in its field. Using consistent nomenclature and mathematical notations throughout all the chapters, this new edition carefully explains the physical principles of magnetic resonance imaging design and implementation. In addition, detailed figures and MR images enable readers to better grasp core concepts, methods, and applications. Magnetic Resonance Imaging, Second Edition begins with an introduction to fundamental principles, with coverage of magnetization, relaxation, quantum mechanics, signal detection and acquisition, Fourier imaging, image reconstruction, contrast, signal, and noise. The second part of the text explores MRI methods and applications, including fast imaging, water-fat separation, steady state gradient echo imaging, echo planar imaging, diffusion-weighted imaging, and induced magnetism. Lastly, the text discusses important hardware issues and parallel imaging. Readers familiar with the first edition will find much new material, including: New chapter dedicated to parallel imaging New sections examining off-resonance excitation principles, contrast optimization in fast steady-state incoherent imaging, and efficient lower-dimension analogues for discrete Fourier transforms in echo planar imaging applications Enhanced sections pertaining to Fourier transforms, filter effects on image resolution, and Bloch equation solutions when both rf pulse and slice select gradient fields are present Valuable improvements throughout with respect to equations, formulas, and text New and updated problems to test further the readers' grasp of core concepts Three appendices at the end of the text offer review material for basic electromagnetism and statistics as well as a list of acquisition parameters for the images in the book. Acclaimed by both students and instructors, the second edition of Magnetic Resonance Imaging offers the most comprehensive and approachable introduction to the physics and the applications of magnetic resonance imaging.


Cardiac CT, PET and MR

Cardiac CT, PET and MR

Author: Vasken Dilsizian

Publisher: John Wiley & Sons

Published: 2011-09-14

Total Pages: 525

ISBN-13: 1444347969

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This careful revision keeps pace with developments in the field, with new chapters on PET Metabolism, CT and MRI in the Emergency Department, Image-Guided Electrophysiology Mapping and Ablation, and Identification of Vulnerable Atherosclerotic Plaque by Radionuclide and CT techniques, plus the introduction of new contributors Udo Hoffman and Stephan Achenbach. Praised in its previous edition as a concise source of essential information, this new edition presents the most recent information in an accessible format and serves as an excellent reference source for all cardiologists, radiologists and nuclear medicine physicians.


NMR of Quadrupolar Nuclei in Solid Materials

NMR of Quadrupolar Nuclei in Solid Materials

Author: Roderick E. Wasylishen

Publisher: John Wiley & Sons

Published: 2012-12-19

Total Pages: 564

ISBN-13: 1118588843

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NMR OF QUADRUPOLAR NUCLEI IN SOLID MATERIALS Over the past 20 years technical developments in superconducting magnet technology and instrumentation have increased the potential of NMR spectroscopy so that it is now possible to study a wide range of solid materials. In addition, one can probe the nuclear environments of many other additional atoms that possess the property of spin. In particular, it is possible to carry out NMR experiments on isotopes that have nuclear spin greater that 1⁄2 (i.e. quadrupolar nuclei). Since more that two-thirds of all NMR active isotopes are quadrupolar nuclei, applications of NMR spectroscopy with quadrupolar nuclei are increasing rapidly. The purpose of this handbook is to provide under a single cover the fundamental principles, techniques and applications of quadrupolar NMR as it pertains to solid materials. Each chapter has been prepared by an expert who has made significant contributions to out understanding and appreciation of the importance of NMR studies of quadrupolar nuclei in solids. The text is divided into three sections: The first provides the reader with the background necessary to appreciate the challenges in acquiring and interpreting NMR spectra of quadrupolar neclei in solids. The second presents cutting-edge techniques and methodology for employing these techniques to investigate quadrupolar nuclei in solids. The final section explores applications of solid-state NMR studies of solids ranging from investigations of dynamics, characterizations of biological samples, organic and inorganic materials, porous materials, glasses, catalysts, semiconductors and high-temperature superconductors. About EMR Handbooks The Encyclopedia of Magnetic Resonance (EMR) publishes a wide range of online articles on all aspects of magnetic resonance in physics, chemistry, biology and medicine. The existence-of this large number of articles, written by experts in various fields, is enabling the publication of a series of EMR Handbooks on specific areas of NMR and MRI. The chapters of each of these handbooks will comprise a carefully chosen selection of Encyclopedia articles. In consultation with the EMR Editorial Board, the EMR Handbooks are coherently planned in advance by specially-selected Editors, and new articles, are written (together with updates of some already existing articles) to give appropriate complete coverage. The handbooks are intended to be of value and interest to research students, postdoctoral fellows and other researchers learning about the scientific area in question and undertaking relevant experiments, whether in academia or industry. Have the content of this handbook and the complete content of the Encyclopedia of Magnetic Resonance at your fingertips! Visit: www.wileyonlinelibrary.com/ref/emr


Pericardial Disease

Pericardial Disease

Author: J. Soler-Soler

Publisher: Springer Science & Business Media

Published: 2012-12-06

Total Pages: 254

ISBN-13: 9400904819

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In November 1986, I was invited to attend a symposium held in Barcelona on Diseases of the Pericardium. The course was directed by Dr. J. Soler-Soler, director of Cardiology at Hospital General Vall d'Hebron in Barcelona. During my brief but delightful visit to this institution, my appreciation of the depth and breadth of study into pericardial diseases, carried out by Dr. Soler and his group, grew into the conviction that these clinical investigators have accumulated a wealth of information concerning pericardial diseases, and that investigators and clinicians practicing in English speaking countries would greatly profit from ready access to the results of the clinical investiga tions into pericardial disease carried out in Barcelona. The proceedings of the Barcelona conference were published in a beauti fully executed volume in the Spanish language edited by Dr. Soler and pro duced by Ediciones Doyma. Because I believe that this work should be brought to the attention of the English speaking scientific and clinical com munities, I encouraged Dr. Soler to have the book translated into English. I knew that this task could be accomplished and that the book would be trans lated into good English without change of its content. My confidence was based upon a translation of my own book, The Pericardium, into Spanish undertaken by Dr. Permanyer, who is a contributor and co-editor of the pre sent volume.


Machine Learning for Medical Image Reconstruction

Machine Learning for Medical Image Reconstruction

Author: Florian Knoll

Publisher: Springer Nature

Published: 2019-10-24

Total Pages: 274

ISBN-13: 3030338436

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This book constitutes the refereed proceedings of the Second International Workshop on Machine Learning for Medical Reconstruction, MLMIR 2019, held in conjunction with MICCAI 2019, in Shenzhen, China, in October 2019. The 24 full papers presented were carefully reviewed and selected from 32 submissions. The papers are organized in the following topical sections: deep learning for magnetic resonance imaging; deep learning for computed tomography; and deep learning for general image reconstruction.