Mathematics for Neuroscientists
Mathematics for Neuroscientists

Author: Fabrizio Gabbiani

Publisher: Academic Press

Published: 2017-02-04

Total Pages: 630

ISBN-13: 0128019069

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Mathematics for Neuroscientists, Second Edition, presents a comprehensive introduction to mathematical and computational methods used in neuroscience to describe and model neural components of the brain from ion channels to single neurons, neural networks and their relation to behavior. The book contains more than 200 figures generated using Matlab code available to the student and scholar. Mathematical concepts are introduced hand in hand with neuroscience, emphasizing the connection between experimental results and theory. - Fully revised material and corrected text - Additional chapters on extracellular potentials, motion detection and neurovascular coupling - Revised selection of exercises with solutions - More than 200 Matlab scripts reproducing the figures as well as a selection of equivalent Python scripts

Mathematical Tools for Neuroscience
Mathematical Tools for Neuroscience

Author: Richard A. Clement

Publisher: Springer Nature

Published: 2022-04-21

Total Pages: 168

ISBN-13: 3030984958

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This book provides a brief but accessible introduction to a set of related, mathematical ideas that have proved useful in understanding the brain and behaviour. If you record the eye movements of a group of people watching a riverside scene then some will look at the river, some will look at the barge by the side of the river, some will look at the people on the bridge, and so on, but if a duck takes off then everybody will look at it. How come the brain is so adept at processing such biological objects? In this book it is shown that brains are especially suited to exploiting the geometric properties of such objects. Central to the geometric approach is the concept of a manifold, which extends the idea of a surface to many dimensions. The manifold can be specified by collections of n-dimensional data points or by the paths of a system through state space. Just as tangent planes can be used to analyse the local linear behaviour of points on a surface, so the extension to tangent spaces can be used to investigate the local linear behaviour of manifolds. The majority of the geometric techniques introduced are all about how to do things with tangent spaces. Examples of the geometric approach to neuroscience include the analysis of colour and spatial vision measurements and the control of eye and arm movements. Additional examples are used to extend the applications of the approach and to show that it leads to new techniques for investigating neural systems. An advantage of following a geometric approach is that it is often possible to illustrate the concepts visually and all the descriptions of the examples are complemented by comprehensively captioned diagrams. The book is intended for a reader with an interest in neuroscience who may have been introduced to calculus in the past but is not aware of the many insights obtained by a geometric approach to the brain. Appendices contain brief reviews of the required background knowledge in neuroscience and calculus.

Mathematical Neuroscience
Mathematical Neuroscience

Author: Stanislaw Brzychczy

Publisher: Academic Press

Published: 2013-07-12

Total Pages: 188

ISBN-13: 9780124114685

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This book investigates the theory and methods of nonlinear analysis of infinite systems based on functional analysis techniques arising in modern mathematics, and examines the solvability of infinite systems of reaction diffusion type equations in partially ordered abstract spaces.

Mathematical Foundations of Neuroscience
Mathematical Foundations of Neuroscience

Author: G. Bard Ermentrout

Publisher: Springer Science & Business Media

Published: 2010-07-01

Total Pages: 434

ISBN-13: 0387877088

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This book applies methods from nonlinear dynamics to problems in neuroscience. It uses modern mathematical approaches to understand patterns of neuronal activity seen in experiments and models of neuronal behavior. The intended audience is researchers interested in applying mathematics to important problems in neuroscience, and neuroscientists who would like to understand how to create models, as well as the mathematical and computational methods for analyzing them. The authors take a very broad approach and use many different methods to solve and understand complex models of neurons and circuits. They explain and combine numerical, analytical, dynamical systems and perturbation methods to produce a modern approach to the types of model equations that arise in neuroscience. There are extensive chapters on the role of noise, multiple time scales and spatial interactions in generating complex activity patterns found in experiments. The early chapters require little more than basic calculus and some elementary differential equations and can form the core of a computational neuroscience course. Later chapters can be used as a basis for a graduate class and as a source for current research in mathematical neuroscience. The book contains a large number of illustrations, chapter summaries and hundreds of exercises which are motivated by issues that arise in biology, and involve both computation and analysis. Bard Ermentrout is Professor of Computational Biology and Professor of Mathematics at the University of Pittsburgh. David Terman is Professor of Mathematics at the Ohio State University.

Models of the Mind
Models of the Mind

Author: Grace Lindsay

Publisher: Bloomsbury Publishing

Published: 2021-03-04

Total Pages: 401

ISBN-13: 1472966457

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The human brain is made up of 85 billion neurons, which are connected by over 100 trillion synapses. For more than a century, a diverse array of researchers searched for a language that could be used to capture the essence of what these neurons do and how they communicate – and how those communications create thoughts, perceptions and actions. The language they were looking for was mathematics, and we would not be able to understand the brain as we do today without it. In Models of the Mind, author and computational neuroscientist Grace Lindsay explains how mathematical models have allowed scientists to understand and describe many of the brain's processes, including decision-making, sensory processing, quantifying memory, and more. She introduces readers to the most important concepts in modern neuroscience, and highlights the tensions that arise when the abstract world of mathematical modelling collides with the messy details of biology. Each chapter of Models of the Mind focuses on mathematical tools that have been applied in a particular area of neuroscience, progressing from the simplest building block of the brain – the individual neuron – through to circuits of interacting neurons, whole brain areas and even the behaviours that brains command. In addition, Grace examines the history of the field, starting with experiments done on frog legs in the late eighteenth century and building to the large models of artificial neural networks that form the basis of modern artificial intelligence. Throughout, she reveals the value of using the elegant language of mathematics to describe the machinery of neuroscience.

Mathematical Tools for Understanding Infectious Disease Dynamics
Mathematical Tools for Understanding Infectious Disease Dynamics

Author: Odo Diekmann

Publisher: Princeton University Press

Published: 2013

Total Pages: 516

ISBN-13: 0691155399

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This book explains how to translate biological assumptions into mathematics to construct useful and consistent models, and how to use the biological interpretation and mathematical reasoning to analyze these models. It shows how to relate models to data through statistical inference, and how to gain important insights into infectious disease dynamics by translating mathematical results back to biology.

Dynamical Systems in Neuroscience
Dynamical Systems in Neuroscience

Author: Eugene M. Izhikevich

Publisher: MIT Press

Published: 2010-01-22

Total Pages: 459

ISBN-13: 0262514206

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Explains the relationship of electrophysiology, nonlinear dynamics, and the computational properties of neurons, with each concept presented in terms of both neuroscience and mathematics and illustrated using geometrical intuition. In order to model neuronal behavior or to interpret the results of modeling studies, neuroscientists must call upon methods of nonlinear dynamics. This book offers an introduction to nonlinear dynamical systems theory for researchers and graduate students in neuroscience. It also provides an overview of neuroscience for mathematicians who want to learn the basic facts of electrophysiology. Dynamical Systems in Neuroscience presents a systematic study of the relationship of electrophysiology, nonlinear dynamics, and computational properties of neurons. It emphasizes that information processing in the brain depends not only on the electrophysiological properties of neurons but also on their dynamical properties. The book introduces dynamical systems, starting with one- and two-dimensional Hodgkin-Huxley-type models and continuing to a description of bursting systems. Each chapter proceeds from the simple to the complex, and provides sample problems at the end. The book explains all necessary mathematical concepts using geometrical intuition; it includes many figures and few equations, making it especially suitable for non-mathematicians. Each concept is presented in terms of both neuroscience and mathematics, providing a link between the two disciplines. Nonlinear dynamical systems theory is at the core of computational neuroscience research, but it is not a standard part of the graduate neuroscience curriculum—or taught by math or physics department in a way that is suitable for students of biology. This book offers neuroscience students and researchers a comprehensive account of concepts and methods increasingly used in computational neuroscience. An additional chapter on synchronization, with more advanced material, can be found at the author's website, www.izhikevich.com.

MATLAB for Neuroscientists
MATLAB for Neuroscientists

Author: Pascal Wallisch

Publisher: Academic Press

Published: 2014-01-09

Total Pages: 571

ISBN-13: 0123838371

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MATLAB for Neuroscientists serves as the only complete study manual and teaching resource for MATLAB, the globally accepted standard for scientific computing, in the neurosciences and psychology. This unique introduction can be used to learn the entire empirical and experimental process (including stimulus generation, experimental control, data collection, data analysis, modeling, and more), and the 2nd Edition continues to ensure that a wide variety of computational problems can be addressed in a single programming environment. This updated edition features additional material on the creation of visual stimuli, advanced psychophysics, analysis of LFP data, choice probabilities, synchrony, and advanced spectral analysis. Users at a variety of levels—advanced undergraduates, beginning graduate students, and researchers looking to modernize their skills—will learn to design and implement their own analytical tools, and gain the fluency required to meet the computational needs of neuroscience practitioners. - The first complete volume on MATLAB focusing on neuroscience and psychology applications - Problem-based approach with many examples from neuroscience and cognitive psychology using real data - Illustrated in full color throughout - Careful tutorial approach, by authors who are award-winning educators with strong teaching experience

Mathematical Methods in Biology and Neurobiology
Mathematical Methods in Biology and Neurobiology

Author: Jürgen Jost

Publisher: Springer Science & Business Media

Published: 2014-02-13

Total Pages: 233

ISBN-13: 1447163532

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Mathematical models can be used to meet many of the challenges and opportunities offered by modern biology. The description of biological phenomena requires a range of mathematical theories. This is the case particularly for the emerging field of systems biology. Mathematical Methods in Biology and Neurobiology introduces and develops these mathematical structures and methods in a systematic manner. It studies: • discrete structures and graph theory • stochastic processes • dynamical systems and partial differential equations • optimization and the calculus of variations. The biological applications range from molecular to evolutionary and ecological levels, for example: • cellular reaction kinetics and gene regulation • biological pattern formation and chemotaxis • the biophysics and dynamics of neurons • the coding of information in neuronal systems • phylogenetic tree reconstruction • branching processes and population genetics • optimal resource allocation • sexual recombination • the interaction of species. Written by one of the most experienced and successful authors of advanced mathematical textbooks, this book stands apart for the wide range of mathematical tools that are featured. It will be useful for graduate students and researchers in mathematics and physics that want a comprehensive overview and a working knowledge of the mathematical tools that can be applied in biology. It will also be useful for biologists with some mathematical background that want to learn more about the mathematical methods available to deal with biological structures and data.

Modern Mathematical Tools and Techniques in Capturing Complexity
Modern Mathematical Tools and Techniques in Capturing Complexity

Author: Leandro Pardo

Publisher: Springer

Published: 2011-05-26

Total Pages: 498

ISBN-13: 3642208533

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Real-life problems are often quite complicated in form and nature and, for centuries, many different mathematical concepts, ideas and tools have been developed to formulate these problems theoretically and then to solve them either exactly or approximately. This book aims to gather a collection of papers dealing with several different problems arising from many disciplines and some modern mathematical approaches to handle them. In this respect, the book offers a wide overview on many of the current trends in Mathematics as valuable formal techniques in capturing and exploiting the complexity involved in real-world situations. Several researchers, colleagues, friends and students of Professor María Luisa Menéndez have contributed to this volume to pay tribute to her and to recognize the diverse contributions she had made to the fields of Mathematics and Statistics and to the profession in general. She had a sweet and strong personality, and instilled great values and work ethics in her students through her dedication to teaching and research. Even though the academic community lost her prematurely, she would continue to provide inspiration to many students and researchers worldwide through her published work.