Algorithms in Bioinformatics

Algorithms in Bioinformatics

Author: Olivier Gascuel

Publisher: Springer

Published: 2003-05-15

Total Pages: 317

ISBN-13: 3540446966

DOWNLOAD EBOOK

This book constitutes the refereed proceedings of the First International Workshop on Algorithms in Bioinformatics, WABI 2001, held in Aarhus, Denmark, in August 2001. The 23 revised full papers presented were carefully reviewed and selected from more than 50 submissions. Among the issues addressed are exact and approximate algorithms for genomics, sequence analysis, gene and signal recognition, alignment, molecular evolution, structure determination or prediction, gene expression and gene networks, proteomics, functional genomics, and drug design; methodological topics from algorithmics; high-performance approaches to hard computational problems in bioinformatics.


Applications of Evolutionary Computing

Applications of Evolutionary Computing

Author: Franz Rothlauf

Publisher: Springer

Published: 2005-03-31

Total Pages: 648

ISBN-13: 3540320032

DOWNLOAD EBOOK

Evolutionary computation (EC) techniques are e?cient nature-inspired pl- ning and optimization methods based on the principles of natural evolution and genetics. Due to their e?ciency and the simple underlying principles, these methods can be used for a large number of problems in the context of problem solving,optimization,andmachinelearning. Alargeandcontinuouslyincreasing number of researchers and practitioners make use of EC techniques in many - plication domains. The book at hand presents a careful selection of relevant EC applications combined with thorough examinations of techniques for a successful application of EC. The presented papers illustrate the current state of the art in the application of EC and should help and inspire researchers and practitioners to develop e?cient EC methods for design and problem solving. All papers in this book were presented during EvoWorkshops 2005, which was a varying collection of workshops on application-oriented aspects of EC. Since 1999, the format of the EvoWorkshops has proved to be very successful and well representative of the advances in the application of EC. Consequently, over the last few years, EvoWorkshops has become one of the major events addressing the application of EC. In contrast to other large conferences in the EC ?eld, the EvoWorkshops focus solely on application aspects of EC and are an important link between EC research and the application of EC in a large variety of di?erent domains.


Computer Analysis of Images and Patterns

Computer Analysis of Images and Patterns

Author: Ainhoa Berciano

Publisher: Springer

Published: 2011-08-19

Total Pages: 598

ISBN-13: 3642236782

DOWNLOAD EBOOK

The two volume set LNCS 6854/6855 constitutes the refereed proceedings of the International Conference on Computer Analysis of Images and Patterns, CAIP 2011, which took place in Seville, Spain, August 29-31, 2011. The 138 papers presented together with 2 invited talks were carefully reviewed and selected from 286 submissions. The papers are organized in topical section on: motion analysis, image and shape models, segmentation and grouping, shape recovery, kernel methods, medical imaging, structural pattern recognition, Biometrics, image and video processing, calibration; and tracking and stereo vision.


Algorithms and Theory of Computation Handbook - 2 Volume Set

Algorithms and Theory of Computation Handbook - 2 Volume Set

Author: Mikhail J. Atallah

Publisher: CRC Press

Published: 2022-05-29

Total Pages: 1904

ISBN-13: 1439832331

DOWNLOAD EBOOK

Algorithms and Theory of Computation Handbook, Second Edition in a two volume set, provides an up-to-date compendium of fundamental computer science topics and techniques. It also illustrates how the topics and techniques come together to deliver efficient solutions to important practical problems. New to the Second Edition: Along with updating and revising many of the existing chapters, this second edition contains more than 20 new chapters. This edition now covers external memory, parameterized, self-stabilizing, and pricing algorithms as well as the theories of algorithmic coding, privacy and anonymity, databases, computational games, and communication networks. It also discusses computational topology, computational number theory, natural language processing, and grid computing and explores applications in intensity-modulated radiation therapy, voting, DNA research, systems biology, and financial derivatives. This best-selling handbook continues to help computer professionals and engineers find significant information on various algorithmic topics. The expert contributors clearly define the terminology, present basic results and techniques, and offer a number of current references to the in-depth literature. They also provide a glimpse of the major research issues concerning the relevant topics


Algorithms in Structural Molecular Biology

Algorithms in Structural Molecular Biology

Author: Bruce R. Donald

Publisher: MIT Press

Published: 2023-08-15

Total Pages: 497

ISBN-13: 0262548798

DOWNLOAD EBOOK

An overview of algorithms important to computational structural biology that addresses such topics as NMR and design and analysis of proteins.Using the tools of information technology to understand the molecular machinery of the cell offers both challenges and opportunities to computational scientists. Over the past decade, novel algorithms have been developed both for analyzing biological data and for synthetic biology problems such as protein engineering. This book explains the algorithmic foundations and computational approaches underlying areas of structural biology including NMR (nuclear magnetic resonance); X-ray crystallography; and the design and analysis of proteins, peptides, and small molecules. Each chapter offers a concise overview of important concepts, focusing on a key topic in the field. Four chapters offer a short course in algorithmic and computational issues related to NMR structural biology, giving the reader a useful toolkit with which to approach the fascinating yet thorny computational problems in this area. A recurrent theme is understanding the interplay between biophysical experiments and computational algorithms. The text emphasizes the mathematical foundations of structural biology while maintaining a balance between algorithms and a nuanced understanding of experimental data. Three emerging areas, particularly fertile ground for research students, are highlighted: NMR methodology, design of proteins and other molecules, and the modeling of protein flexibility. The next generation of computational structural biologists will need training in geometric algorithms, provably good approximation algorithms, scientific computation, and an array of techniques for handling noise and uncertainty in combinatorial geometry and computational biophysics. This book is an essential guide for young scientists on their way to research success in this exciting field.


Algorithms for Big Data

Algorithms for Big Data

Author: Hannah Bast

Publisher: Springer Nature

Published: 2022

Total Pages: 296

ISBN-13: 3031215346

DOWNLOAD EBOOK

This open access book surveys the progress in addressing selected challenges related to the growth of big data in combination with increasingly complicated hardware. It emerged from a research program established by the German Research Foundation (DFG) as priority program SPP 1736 on Algorithmics for Big Data where researchers from theoretical computer science worked together with application experts in order to tackle problems in domains such as networking, genomics research, and information retrieval. Such domains are unthinkable without substantial hardware and software support, and these systems acquire, process, exchange, and store data at an exponential rate. The chapters of this volume summarize the results of projects realized within the program and survey-related work. This is an open access book.


Algorithms in Bioinformatics

Algorithms in Bioinformatics

Author: Steven L. Salzberg

Publisher: Springer

Published: 2009-09-19

Total Pages: 440

ISBN-13: 3642042414

DOWNLOAD EBOOK

These proceedings contain papers from the 2009 Workshop on Algorithms in Bioinformatics (WABI), held at the University of Pennsylvania in Philadelphia, Pennsylvania during September 12–13, 2009. WABI 2009 was the ninth annual conference in this series, which focuses on novel algorithms that address imp- tantproblemsingenomics,molecularbiology,andevolution.Theconference- phasizes research that describes computationally e?cient algorithms and data structures that have been implemented and tested in simulations and on real data. WABI is sponsored by the European Association for Theoretical C- puter Science (EATCS) and the International Society for Computational Bi- ogy (ISCB). WABI 2009 was supported by the Penn Genome Frontiers Institute and the Penn Center for Bioinformatics at the University of Pennsylvania. For the 2009 conference, 90 full papers were submitted for review by the Program Committee, and from this strong ?eld of submissions, 34 papers were chosen for presentation at the conference and publication in the proceedings. The ?nal programcovered a wide range of topics including gene interaction n- works, molecular phylogeny, RNA and protein structure, and genome evolution.


Algorithms in Bioinformatics

Algorithms in Bioinformatics

Author: Ben Raphael

Publisher: Springer

Published: 2012-08-29

Total Pages: 465

ISBN-13: 364233122X

DOWNLOAD EBOOK

This book constitutes the refereed proceedings of the 12th International Workshop on Algorithms in Bioinformatics, WABI 2012, held in Ljubljana, Slovenia, in September 2012. WABI 2012 is one of six workshops which, along with the European Symposium on Algorithms (ESA), constitute the ALGO annual meeting and focuses on algorithmic advances in bioinformatics, computational biology, and systems biology with a particular emphasis on discrete algorithms and machine-learning methods that address important problems in molecular biology. The 35 full papers presented were carefully reviewed and selected from 92 submissions. The papers include algorithms for a variety of biological problems including phylogeny, DNA and RNA sequencing and analysis, protein structure, and others.


Intelligent Imaging and Analysis

Intelligent Imaging and Analysis

Author: DaeEun Kim

Publisher: MDPI

Published: 2020-03-05

Total Pages: 492

ISBN-13: 3039219200

DOWNLOAD EBOOK

Imaging and analysis are widely involved in various research fields, including biomedical applications, medical imaging and diagnosis, computer vision, autonomous driving, and robot controls. Imaging and analysis are now facing big changes regarding intelligence, due to the breakthroughs of artificial intelligence techniques, including deep learning. Many difficulties in image generation, reconstruction, de-noising skills, artifact removal, segmentation, detection, and control tasks are being overcome with the help of advanced artificial intelligence approaches. This Special Issue focuses on the latest developments of learning-based intelligent imaging techniques and subsequent analyses, which include photographic imaging, medical imaging, detection, segmentation, medical diagnosis, computer vision, and vision-based robot control. These latest technological developments will be shared through this Special Issue for the various researchers who are involved with imaging itself, or are using image data and analysis for their own specific purposes.