Dynamic Models in Biology
Dynamic Models in Biology

Author: Stephen P. Ellner

Publisher: Princeton University Press

Published: 2011-09-19

Total Pages: 352

ISBN-13: 1400840961

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From controlling disease outbreaks to predicting heart attacks, dynamic models are increasingly crucial for understanding biological processes. Many universities are starting undergraduate programs in computational biology to introduce students to this rapidly growing field. In Dynamic Models in Biology, the first text on dynamic models specifically written for undergraduate students in the biological sciences, ecologist Stephen Ellner and mathematician John Guckenheimer teach students how to understand, build, and use dynamic models in biology. Developed from a course taught by Ellner and Guckenheimer at Cornell University, the book is organized around biological applications, with mathematics and computing developed through case studies at the molecular, cellular, and population levels. The authors cover both simple analytic models--the sort usually found in mathematical biology texts--and the complex computational models now used by both biologists and mathematicians. Linked to a Web site with computer-lab materials and exercises, Dynamic Models in Biology is a major new introduction to dynamic models for students in the biological sciences, mathematics, and engineering.

Analytical Methods for Dynamic Modelers
Analytical Methods for Dynamic Modelers

Author: Hazhir Rahmandad

Publisher: MIT Press

Published: 2015-11-27

Total Pages: 443

ISBN-13: 0262331438

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A user-friendly introduction to some of the most useful analytical tools for model building, estimation, and analysis, presenting key methods and examples. Simulation modeling is increasingly integrated into research and policy analysis of complex sociotechnical systems in a variety of domains. Model-based analysis and policy design inform a range of applications in fields from economics to engineering to health care. This book offers a hands-on introduction to key analytical methods for dynamic modeling. Bringing together tools and methodologies from fields as diverse as computational statistics, econometrics, and operations research in a single text, the book can be used for graduate-level courses and as a reference for dynamic modelers who want to expand their methodological toolbox. The focus is on quantitative techniques for use by dynamic modelers during model construction and analysis, and the material presented is accessible to readers with a background in college-level calculus and statistics. Each chapter describes a key method, presenting an introduction that emphasizes the basic intuition behind each method, tutorial style examples, references to key literature, and exercises. The chapter authors are all experts in the tools and methods they present. The book covers estimation of model parameters using quantitative data; understanding the links between model structure and its behavior; and decision support and optimization. An online appendix offers computer code for applications, models, and solutions to exercises. Contributors Wenyi An, Edward G. Anderson Jr., Yaman Barlas, Nishesh Chalise, Robert Eberlein, Hamed Ghoddusi, Winfried Grassmann, Peter S. Hovmand, Mohammad S. Jalali, Nitin Joglekar, David Keith, Juxin Liu, Erling Moxnes, Rogelio Oliva, Nathaniel D. Osgood, Hazhir Rahmandad, Raymond Spiteri, John Sterman, Jeroen Struben, Burcu Tan, Karen Yee, Gönenç Yücel

Dynamic Modeling
Dynamic Modeling

Author: Bruce Hannon

Publisher: Springer Science & Business Media

Published: 2013-11-11

Total Pages: 247

ISBN-13: 1468402242

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Dynamic Modeling introduces an approach to modeling that makes it a more practical, intuitive endeavour. The book enables readers to convert their understanding of a phenomenon to a computer model, and then to run the model and let it yield the inevitable dynamic consequences built into the structure of the model. Part I provides an introduction to modeling dynamic systems, while Part II offers general methods for modeling. Parts III through to VIII then apply these methods to model real-world phenomena from chemistry, genetics, ecology, economics, and engineering. To develop and execute dynamic simulation models, Dynamic Modeling comes with STELLA II run- time software for Windows-based computers, as well as computer files of sample models used in the book. A clear, approachable introduction to the modeling process, of interest in any field where real problems can be illuminated by computer simulation.

Bayesian Forecasting and Dynamic Models
Bayesian Forecasting and Dynamic Models

Author: Mike West

Publisher: Springer Science & Business Media

Published: 2013-06-29

Total Pages: 720

ISBN-13: 1475793650

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In this book we are concerned with Bayesian learning and forecast ing in dynamic environments. We describe the structure and theory of classes of dynamic models, and their uses in Bayesian forecasting. The principles, models and methods of Bayesian forecasting have been developed extensively during the last twenty years. This devel opment has involved thorough investigation of mathematical and sta tistical aspects of forecasting models and related techniques. With this has come experience with application in a variety of areas in commercial and industrial, scientific and socio-economic fields. In deed much of the technical development has been driven by the needs of forecasting practitioners. As a result, there now exists a relatively complete statistical and mathematical framework, although much of this is either not properly documented or not easily accessible. Our primary goals in writing this book have been to present our view of this approach to modelling and forecasting, and to provide a rea sonably complete text for advanced university students and research workers. The text is primarily intended for advanced undergraduate and postgraduate students in statistics and mathematics. In line with this objective we present thorough discussion of mathematical and statistical features of Bayesian analyses of dynamic models, with illustrations, examples and exercises in each Chapter.

Dynamic Modeling and Applications for Global Economic Analysis
Dynamic Modeling and Applications for Global Economic Analysis

Author: Elena Ianchovichina

Publisher: Cambridge University Press

Published: 2012-02-20

Total Pages: 449

ISBN-13: 1107011698

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This book presents the technical aspects of an economic model used to examine issues of global economic significance, such as the impact on the world economy of changes in trade and environmental policy. The book provides a number of studies using the model to examine trade reform, growth and investment, climate change, natural resources, technology, and demographic change and migration.

System Dynamics Modeling with R
System Dynamics Modeling with R

Author: Jim Duggan

Publisher: Springer

Published: 2016-06-14

Total Pages: 188

ISBN-13: 3319340433

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This new interdisciplinary work presents system dynamics as a powerful approach to enable analysts build simulation models of social systems, with a view toward enhancing decision making. Grounded in the feedback perspective of complex systems, the book provides a practical introduction to system dynamics, and covers key concepts such as stocks, flows, and feedback. Societal challenges such as predicting the impact of an emerging infectious disease, estimating population growth, and assessing the capacity of health services to cope with demographic change can all benefit from the application of computer simulation. This text explains important building blocks of the system dynamics approach, including material delays, stock management heuristics, and how to model effects between different systemic elements. Models from epidemiology, health systems, and economics are presented to illuminate important ideas, and the R programming language is used to provide an open-source and interoperable way to build system dynamics models. System Dynamics Modeling with R also describes hands-on techniques that can enhance client confidence in system dynamic models, including model testing, model analysis, and calibration. Developed from the author’s course in system dynamics, this book is written for undergraduate and postgraduate students of management, operations research, computer science, and applied mathematics. Its focus is on the fundamental building blocks of system dynamics models, and its choice of R as a modeling language make it an ideal reference text for those wishing to integrate system dynamics modeling with related data analytic methods and techniques.

Dynamic Modeling in Behavioral Ecology
Dynamic Modeling in Behavioral Ecology

Author: Marc Mangel

Publisher: Princeton University Press

Published: 1988

Total Pages: 328

ISBN-13: 9780691085067

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This book describes a powerful and flexible technique for the modeling of behavior, based on evolutionary principles. The technique employs stochastic dynamic programming and permits the analysis of behavioral adaptations wherein organisms respond to changes in their environment and in their own current physiological state. Models can be constructed to reflect sequential decisions concerned simultaneously with foraging, reproduction, predator avoidance, and other activities. The authors show how to construct and use dynamic behavioral models. Part I covers the mathematical background and computer programming, and then uses a paradigm of foraging under risk of predation to exemplify the general modeling technique. Part II consists of five "applied" chapters illustrating the scope of the dynamic modeling approach. They treat hunting behavior in lions, reproduction in insects, migrations of aquatic organisms, clutch size and parental care in birds, and movement of spiders and raptors. Advanced topics, including the study of dynamic evolutionarily stable strategies, are discussed in Part III.

Handbook of Dynamic System Modeling
Handbook of Dynamic System Modeling

Author: Paul A. Fishwick

Publisher: CRC Press

Published: 2007-06-01

Total Pages: 756

ISBN-13: 1420010859

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The topic of dynamic models tends to be splintered across various disciplines, making it difficult to uniformly study the subject. Moreover, the models have a variety of representations, from traditional mathematical notations to diagrammatic and immersive depictions. Collecting all of these expressions of dynamic models, the Handbook of Dynamic Sy

Dynamic Data Analysis
Dynamic Data Analysis

Author: James Ramsay

Publisher: Springer

Published: 2017-06-27

Total Pages: 242

ISBN-13: 1493971905

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This text focuses on the use of smoothing methods for developing and estimating differential equations following recent developments in functional data analysis and building on techniques described in Ramsay and Silverman (2005) Functional Data Analysis. The central concept of a dynamical system as a buffer that translates sudden changes in input into smooth controlled output responses has led to applications of previously analyzed data, opening up entirely new opportunities for dynamical systems. The technical level has been kept low so that those with little or no exposure to differential equations as modeling objects can be brought into this data analysis landscape. There are already many texts on the mathematical properties of ordinary differential equations, or dynamic models, and there is a large literature distributed over many fields on models for real world processes consisting of differential equations. However, a researcher interested in fitting such a model to data, or a statistician interested in the properties of differential equations estimated from data will find rather less to work with. This book fills that gap.

Dynamic Modeling of Environmental Systems
Dynamic Modeling of Environmental Systems

Author: Michael L. Deaton

Publisher: Springer Science & Business Media

Published: 2012-12-06

Total Pages: 210

ISBN-13: 1461213002

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A primer on modeling concepts and applications that is specifically geared toward the environmental field. Sections on modeling terminology, the uses of models, the model-building process, and the interpretation of output provide the foundation for detailed applications. After an introduction to the basics of dynamic modeling, the book leads students through an analysis of several environmental problems, including surface-water pollution, matter-cycling disruptions, and global warming. The scientific and technical context is provided for each problem, and the methods for analyzing and designing appropriate modeling approaches is provided. While the mathematical content does not exceed the level of a first-semester calculus course, the book gives students all of the background, examples, and practice exercises needed both to use and understand environmental modeling. It is suitable for upper-level undergraduate and beginning-graduate level environmental professionals seeking an introduction to modeling in their field.