The rapid demise of coral reefs worldwide has spurred efforts to develop innovative conservation and restoration methods. Many of these rely on omics approaches to produce genetic, genomic, transcriptomic, epigenomic or metabolomic data to inform conservation and restoration interventions. This book provides the state of play of this field. It discusses topics ranging from how genomic and environmental DNA (eDNA) data can be used to inform marine protected area design and cryopreservation strategies, the use of knowledge on adaptive genetic and epigenetic variation to maximise environmental stress tolerance of coral stock, harnessing transcriptome data to develop early warning markers, the use of microbial symbiont omics data in guiding restoration strategies, to applications of metabolomics and genetic engineering. How best to translate omics data to resource managers is also discussed.
In the last two decades since publication of the first edition, substantial advancements have been made in the science, the need for transdisciplinary approaches to coral reef protection greater than ever before. This new edition, now in full color throughout with accompanying animations, goes beyond identifying foundational information and current problems to pinpoint science-based solutions for managers, stakeholders and policy makers. Coral reefs are connected by currents that carry plankton and the larvae of many reef-based organisms. Further, they supply food to reefs. Currents also bring pollutants from the land and, together with the atmosphere, affect the surrounding ocean. The chapters in this book provide a much-needed review of the biophysics of reefs with an emphasis on the Great Barrier Reef as an ecosystem. The focus is on interactions between currents, waves, sediment and the dynamics of coastal and reef-based ecosystems. The topographic complexity of reefs redirects mainstream currents, creates tidal eddies, mushroom jets, boundary layers, stagnation zones, and this turbulence is enhanced by the oceanographic chaos in the adjoining Coral Sea. This is the environment in which particles and organisms, of a range of sizes live, from tiny plankton to megafauna. This generates faunal connectivity at scales of meters to thousands of km within the Great Barrier Reef and with the adjoining ocean. Pollution from land-use is increasing and remedial measures are described both on land and on coral cays. The impact of climate change is quantified in case studies about mangroves and corals. Modelling this biophysical complexity is increasing in sophistication, and the authors suggest how the field can advance further.
Now more than 60 years old, this series remains one of the most cited sources in marine science and oceanography. A book/journal hybrid, it has a strong Impact Factor and a global reputation. Chapters are authored by leading experts from around the world, while an international Editorial Board ensures continued high quality and rigorous peer review of published articles. The ever increasing interest in work in oceanography and marine biology and its relevance to global environmental issues, especially global climate change and its impacts, creates a demand for authoritative reviews summarizing the results of recent research. Three chapters in the volume are available Open Access.
Assessments and Conservation of Biological Diversity from Coral Reefs to the Deep Sea: Uncovering Buried Treasures and the Value of the Benthos examines marine benthic habitats around the world that are linked by their physical location at the bottom of the oceans. The book approaches deep sea marine biodiversity with perspectives on genetics, microbiology and evolution, weaving a narrative of vital expert linkages with the goal of protecting something that most people cannot witness or experience. It provides a full assessment of biological diversity within benthic habitats, from coral reefs to plankton and fish species, and offers global case studies. It is the ideal resource for marine conservationists and biologists aiming to expand their knowledge and efforts to the rarely seen, yet equally important, realms of the ocean and respective benthic species. As these deep-sea ecosystems and their species face unprecedented threats of destruction and extinction due to factors including climate change, this book provides the most current knowledge of this undersea world along with solutions for its conservation. - Compares and contrasts between shallow and marine habitats to reveal revolutionary connections and continuity - Analyzes modern threats and gaps in biological knowledge regarding benthic communities - Examines benthic biodiversity through vertical vs. horizontal gradients - Poses possible solutions for the conservation of benthic habitats and organisms
A decade of technological advances and research on the human microbiome has re-defined our understanding of biological systems, and now offers diagnostic tools and new approaches to human health. Likewise, marine ecosystems are driven by their microbiome, the ensemble of microscopic organisms that inhabit the water column, sediments and aquatic organisms, and regulate most fluxes of energy and matter. While the human microbiome is composed principally of bacteria, the marine microbiome has a much broader ensemble of microscopic organisms with sizes spanning from viruses of a few tens of nanometres to metazoans of several centimetres. Advances in high throughput imaging and sequencing are emerging in aquatic science, providing important insights into ecosystem structure and functions, and contributing to develop new indicators of ecosystem health and potential hazards to living resources and humans. A number of research exploration and monitoring programs such as the Tara Oceans global expedition and the Marine Biological Observing Network (MBON), and the rising popularity of environmental DNA (eDNA) already led to a wealth of data. However, the wide range of methodologies used in this early exploration phase poses a challenge to integrative studies, prompting community responses such as the Genomic Standards Consortium. This Research Topic will foster cross-community exchange of standards and best practices. It is an opportunity for the different communities working on marine microbiomes to discuss the advantages and the limitations of their sampling and analysis methods. The collection of papers will constitute a knowledge base aimed at (1) addressing the integration of existing observations from heterogenous methods and data types, and (2) working towards cross-communities standards and best practices for future observations and experiments. This Research Topic will publish comprehensive methodological papers that review a sufficiently large body of field or experimental work. Supporting (meta)data, such as environmental context, sampling materials, sample treatments, extraction and imaging yields, must be provided and should preferably be uploaded to an online sample registry such as BioSamples. Protocols and analytical methods should preferably be uploaded to an online repository such as Protocols.io. We welcome contributions from communities working in different environments: · focus on marine systems, but also interested in estuarine and freshwater systems · coastal, open ocean and deep-sea regions · benthic, pelagic and aerosol environments We strongly encourage contributions from communities involved in: · networks of local observatories and long-term monitoring programs · regional & basin-scale surveys, and global expeditions · biodiscovery linked to economic sectors such as pharmaceutics and bioengineering · environmental and health assessments linked to economic sectors such as aquaculture, fisheries, seabed mining, wind-farms, and oil and gas
This title will introduce readers to coral reef ecosystems, the plants and animals that thrive there, its climate, its food web, any threats to it, and conservation efforts. Readers will also learn about the most well known coral reefs and their unique characteristics. Aligned to Common Core Standards and correlated to state standards. Core Library is an imprint of Abdo Publishing, a division of ABDO.
Coral reef declines have been recorded for all major tropical ocean basins since the 1980s, averaging approximately 30-50% reductions in reef cover globally. These losses are a result of numerous problems, including habitat destruction, pollution, overfishing, disease, and climate change. Greenhouse gas emissions and the associated increases in ocean temperature and carbon dioxide (CO2) concentrations have been implicated in increased reports of coral bleaching, disease outbreaks, and ocean acidification (OA). For the hundreds of millions of people who depend on reefs for food or livelihoods, the thousands of communities that depend on reefs for wave protection, the people whose cultural practices are tied to reef resources, and the many economies that depend on reefs for fisheries or tourism, the health and maintenance of this major global ecosystem is crucial. A growing body of research on coral physiology, ecology, molecular biology, and responses to stress has revealed potential tools to increase coral resilience. Some of this knowledge is poised to provide practical interventions in the short-term, whereas other discoveries are poised to facilitate research that may later open the doors to additional interventions. A Research Review of Interventions to Increase the Persistence and Resilience of Coral Reefs reviews the state of science on genetic, ecological, and environmental interventions meant to enhance the persistence and resilience of coral reefs. The complex nature of corals and their associated microbiome lends itself to a wide range of possible approaches. This first report provides a summary of currently available information on the range of interventions present in the scientific literature and provides a basis for the forthcoming final report.
Coral reefs represent the most spectacular and diverse marine ecosystem on the planet as well as a critical source of income for millions of people. However, the combined effects of human activity have led to a rapid decline in the health of reefs worldwide, with many now facing complete destruction. Their world-wide deterioration and over-exploitation has continued and even accelerated in many areas since the publication of the first edition in 2009. At the same time, there has been a near doubling in the number of scientific papers that have been written in this short time about coral reef biology and the ability to acclimate to ocean warming and acidification. This new edition has been thoroughly revised and updated, incorporating the significant increase in knowledge gained over the last decade whilst retaining the book's focus as a concise and affordable overview of the field. The Biology of Coral Reefs provides an integrated overview of the function, physiology, ecology, and behaviour of coral reef organisms. Each chapter is enriched with a selection of 'boxes' on specific aspects written by internationally recognised experts. As with other books in the Biology of Habitats Series, the emphasis in this book is on the organisms that dominate this marine environment although pollution, conservation, climate change, and experimental aspects are also included. Indeed, particular emphasis is placed on conservation and management due to the habitat's critically endangered status. A global range of examples is employed which gives the book international relevance.
Coral reef communities are among the most complex, mature and productive ecosystems on earth. Their activity resulted in the creation of vast lime constructions. Being extremely productive and having the function of a powerful biofilter, coral reefs play an important role in global biogeochemical processes and in the reproduction of food resources in tropical marine regions. All aspects of coral reef science are covered systematically and on the basis of a holistic ecosystem approach. The geological history of coral reefs, their geomorphology as well as biology including community structure of reef biota, their functional characteristics, physiological aspects, biogeochemical metabolism, energy balance, environmental problems and management of resources are treated in detail.
