Data Processing Handbook for Complex Biological Data Sources

Data Processing Handbook for Complex Biological Data Sources

Author: Gauri Misra

Publisher: Academic Press

Published: 2019-03-23

Total Pages: 191

ISBN-13: 0128172800

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Data Processing Handbook for Complex Biological Data provides relevant and to the point content for those who need to understand the different types of biological data and the techniques to process and interpret them. The book includes feedback the editor received from students studying at both undergraduate and graduate levels, and from her peers. In order to succeed in data processing for biological data sources, it is necessary to master the type of data and general methods and tools for modern data processing. For instance, many labs follow the path of interdisciplinary studies and get their data validated by several methods. Researchers at those labs may not perform all the techniques themselves, but either in collaboration or through outsourcing, they make use of a range of them, because, in the absence of cross validation using different techniques, the chances for acceptance of an article for publication in high profile journals is weakened. - Explains how to interpret enormous amounts of data generated using several experimental approaches in simple terms, thus relating biology and physics at the atomic level - Presents sample data files and explains the usage of equations and web servers cited in research articles to extract useful information from their own biological data - Discusses, in detail, raw data files, data processing strategies, and the web based sources relevant for data processing


Computers and Data Processing

Computers and Data Processing

Author: Harvey M. Deitel

Publisher: Academic Press

Published: 2014-05-10

Total Pages: 665

ISBN-13: 148326470X

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Computers and Data Processing provides information pertinent to the advances in the computer field. This book covers a variety of topics, including the computer hardware, computer programs or software, and computer applications systems. Organized into five parts encompassing 19 chapters, this book begins with an overview of some of the fundamental computing concepts. This text then explores the evolution of modern computing systems from the earliest mechanical calculating devices to microchips. Other chapters consider how computers present their results and explain the storage and retrieval of massive amounts of computer-accessible information from secondary storage devices. This book discusses as well the development installation, evaluation, and control of computer systems. The final chapter discusses the use of computers in the transportation systems and the ways in which they make possible other innovations in transportation. This book is a valuable resource for computer scientists, systems analysts, computer programmers, mathematicians, and computer specialists.


Practical Real-time Data Processing and Analytics

Practical Real-time Data Processing and Analytics

Author: Shilpi Saxena

Publisher: Packt Publishing Ltd

Published: 2017-09-28

Total Pages: 354

ISBN-13: 1787289869

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A practical guide to help you tackle different real-time data processing and analytics problems using the best tools for each scenario About This Book Learn about the various challenges in real-time data processing and use the right tools to overcome them This book covers popular tools and frameworks such as Spark, Flink, and Apache Storm to solve all your distributed processing problems A practical guide filled with examples, tips, and tricks to help you perform efficient Big Data processing in real-time Who This Book Is For If you are a Java developer who would like to be equipped with all the tools required to devise an end-to-end practical solution on real-time data streaming, then this book is for you. Basic knowledge of real-time processing would be helpful, and knowing the fundamentals of Maven, Shell, and Eclipse would be great. What You Will Learn Get an introduction to the established real-time stack Understand the key integration of all the components Get a thorough understanding of the basic building blocks for real-time solution designing Garnish the search and visualization aspects for your real-time solution Get conceptually and practically acquainted with real-time analytics Be well equipped to apply the knowledge and create your own solutions In Detail With the rise of Big Data, there is an increasing need to process large amounts of data continuously, with a shorter turnaround time. Real-time data processing involves continuous input, processing and output of data, with the condition that the time required for processing is as short as possible. This book covers the majority of the existing and evolving open source technology stack for real-time processing and analytics. You will get to know about all the real-time solution aspects, from the source to the presentation to persistence. Through this practical book, you'll be equipped with a clear understanding of how to solve challenges on your own. We'll cover topics such as how to set up components, basic executions, integrations, advanced use cases, alerts, and monitoring. You'll be exposed to the popular tools used in real-time processing today such as Apache Spark, Apache Flink, and Storm. Finally, you will put your knowledge to practical use by implementing all of the techniques in the form of a practical, real-world use case. By the end of this book, you will have a solid understanding of all the aspects of real-time data processing and analytics, and will know how to deploy the solutions in production environments in the best possible manner. Style and Approach In this practical guide to real-time analytics, each chapter begins with a basic high-level concept of the topic, followed by a practical, hands-on implementation of each concept, where you can see the working and execution of it. The book is written in a DIY style, with plenty of practical use cases, well-explained code examples, and relevant screenshots and diagrams.


Knowledge Graphs and Big Data Processing

Knowledge Graphs and Big Data Processing

Author: Valentina Janev

Publisher: Springer Nature

Published: 2020-07-15

Total Pages: 212

ISBN-13: 3030531996

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This open access book is part of the LAMBDA Project (Learning, Applying, Multiplying Big Data Analytics), funded by the European Union, GA No. 809965. Data Analytics involves applying algorithmic processes to derive insights. Nowadays it is used in many industries to allow organizations and companies to make better decisions as well as to verify or disprove existing theories or models. The term data analytics is often used interchangeably with intelligence, statistics, reasoning, data mining, knowledge discovery, and others. The goal of this book is to introduce some of the definitions, methods, tools, frameworks, and solutions for big data processing, starting from the process of information extraction and knowledge representation, via knowledge processing and analytics to visualization, sense-making, and practical applications. Each chapter in this book addresses some pertinent aspect of the data processing chain, with a specific focus on understanding Enterprise Knowledge Graphs, Semantic Big Data Architectures, and Smart Data Analytics solutions. This book is addressed to graduate students from technical disciplines, to professional audiences following continuous education short courses, and to researchers from diverse areas following self-study courses. Basic skills in computer science, mathematics, and statistics are required.


Data Analysis Methods in Physical Oceanography

Data Analysis Methods in Physical Oceanography

Author: Richard E. Thomson

Publisher: Elsevier

Published: 2001-04-03

Total Pages: 654

ISBN-13: 0080477003

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Data Analysis Methods in Physical Oceanography is a practical referenceguide to established and modern data analysis techniques in earth and oceansciences. This second and revised edition is even more comprehensive with numerous updates, and an additional appendix on 'Convolution and Fourier transforms'. Intended for both students and established scientists, the fivemajor chapters of the book cover data acquisition and recording, dataprocessing and presentation, statistical methods and error handling,analysis of spatial data fields, and time series analysis methods. Chapter 5on time series analysis is a book in itself, spanning a wide diversity oftopics from stochastic processes and stationarity, coherence functions,Fourier analysis, tidal harmonic analysis, spectral and cross-spectralanalysis, wavelet and other related methods for processing nonstationarydata series, digital filters, and fractals. The seven appendices includeunit conversions, approximation methods and nondimensional numbers used ingeophysical fluid dynamics, presentations on convolution, statisticalterminology, and distribution functions, and a number of importantstatistical tables. Twenty pages are devoted to references. Featuring:• An in-depth presentation of modern techniques for the analysis of temporal and spatial data sets collected in oceanography, geophysics, and other disciplines in earth and ocean sciences.• A detailed overview of oceanographic instrumentation and sensors - old and new - used to collect oceanographic data.• 7 appendices especially applicable to earth and ocean sciences ranging from conversion of units, through statistical tables, to terminology and non-dimensional parameters. In praise of the first edition: "(...)This is a very practical guide to the various statistical analysis methods used for obtaining information from geophysical data, with particular reference to oceanography(...)The book provides both a text for advanced students of the geophysical sciences and a useful reference volume for researchers." Aslib Book Guide Vol 63, No. 9, 1998 "(...)This is an excellent book that I recommend highly and will definitely use for my own research and teaching." EOS Transactions, D.A. Jay, 1999 "(...)In summary, this book is the most comprehensive and practical source of information on data analysis methods available to the physical oceanographer. The reader gets the benefit of extremely broad coverage and an excellent set of examples drawn from geographical observations." Oceanography, Vol. 12, No. 3, A. Plueddemann, 1999 "(...)Data Analysis Methods in Physical Oceanography is highly recommended for a wide range of readers, from the relative novice to the experienced researcher. It would be appropriate for academic and special libraries." E-Streams, Vol. 2, No. 8, P. Mofjelf, August 1999


Towards Interoperable Research Infrastructures for Environmental and Earth Sciences

Towards Interoperable Research Infrastructures for Environmental and Earth Sciences

Author: Zhiming Zhao

Publisher: Springer Nature

Published: 2020-07-24

Total Pages: 375

ISBN-13: 3030528294

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This open access book summarises the latest developments on data management in the EU H2020 ENVRIplus project, which brought together more than 20 environmental and Earth science research infrastructures into a single community. It provides readers with a systematic overview of the common challenges faced by research infrastructures and how a ‘reference model guided’ engineering approach can be used to achieve greater interoperability among such infrastructures in the environmental and earth sciences. The 20 contributions in this book are structured in 5 parts on the design, development, deployment, operation and use of research infrastructures. Part one provides an overview of the state of the art of research infrastructure and relevant e-Infrastructure technologies, part two discusses the reference model guided engineering approach, the third part presents the software and tools developed for common data management challenges, the fourth part demonstrates the software via several use cases, and the last part discusses the sustainability and future directions.


Concurrent Data Processing in Elixir

Concurrent Data Processing in Elixir

Author: Svilen Gospodinov

Publisher: Pragmatic Bookshelf

Published: 2021-07-25

Total Pages: 221

ISBN-13: 1680508962

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Learn different ways of writing concurrent code in Elixir and increase your application's performance, without sacrificing scalability or fault-tolerance. Most projects benefit from running background tasks and processing data concurrently, but the world of OTP and various libraries can be challenging. Which Supervisor and what strategy to use? What about GenServer? Maybe you need back-pressure, but is GenStage, Flow, or Broadway a better choice? You will learn everything you need to know to answer these questions, start building highly concurrent applications in no time, and write code that's not only fast, but also resilient to errors and easy to scale. Whether you are building a high-frequency stock trading application or a consumer web app, you need to know how to leverage concurrency to build applications that are fast and efficient. Elixir and the OTP offer a range of powerful tools, and this guide will show you how to choose the best tool for each job, and use it effectively to quickly start building highly concurrent applications. Learn about Tasks, supervision trees, and the different types of Supervisors available to you. Understand why processes and process linking are the building blocks of concurrency in Elixir. Get comfortable with the OTP and use the GenServer behaviour to maintain process state for long-running jobs. Easily scale the number of running processes using the Registry. Handle large volumes of data and traffic spikes with GenStage, using back-pressure to your advantage. Create your first multi-stage data processing pipeline using producer, consumer, and producer-consumer stages. Process large collections with Flow, using MapReduce and more in parallel. Thanks to Broadway, you will see how easy it is to integrate with popular message broker systems, or even existing GenStage producers. Start building the high-performance and fault-tolerant applications Elixir is famous for today. What You Need: You'll need Elixir 1.9+ and Erlang/OTP 22+ installed on a Mac OS X, Linux, or Windows machine.


Large Scale and Big Data

Large Scale and Big Data

Author: Sherif Sakr

Publisher: CRC Press

Published: 2014-06-25

Total Pages: 640

ISBN-13: 1466581506

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Large Scale and Big Data: Processing and Management provides readers with a central source of reference on the data management techniques currently available for large-scale data processing. Presenting chapters written by leading researchers, academics, and practitioners, it addresses the fundamental challenges associated with Big Data processing tools and techniques across a range of computing environments. The book begins by discussing the basic concepts and tools of large-scale Big Data processing and cloud computing. It also provides an overview of different programming models and cloud-based deployment models. The book’s second section examines the usage of advanced Big Data processing techniques in different domains, including semantic web, graph processing, and stream processing. The third section discusses advanced topics of Big Data processing such as consistency management, privacy, and security. Supplying a comprehensive summary from both the research and applied perspectives, the book covers recent research discoveries and applications, making it an ideal reference for a wide range of audiences, including researchers and academics working on databases, data mining, and web scale data processing. After reading this book, you will gain a fundamental understanding of how to use Big Data-processing tools and techniques effectively across application domains. Coverage includes cloud data management architectures, big data analytics visualization, data management, analytics for vast amounts of unstructured data, clustering, classification, link analysis of big data, scalable data mining, and machine learning techniques.


Big Data Analytics for Sensor-Network Collected Intelligence

Big Data Analytics for Sensor-Network Collected Intelligence

Author: Hui-Huang Hsu

Publisher: Morgan Kaufmann

Published: 2017-02-02

Total Pages: 328

ISBN-13: 012809625X

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Big Data Analytics for Sensor-Network Collected Intelligence explores state-of-the-art methods for using advanced ICT technologies to perform intelligent analysis on sensor collected data. The book shows how to develop systems that automatically detect natural and human-made events, how to examine people's behaviors, and how to unobtrusively provide better services. It begins by exploring big data architecture and platforms, covering the cloud computing infrastructure and how data is stored and visualized. The book then explores how big data is processed and managed, the key security and privacy issues involved, and the approaches used to ensure data quality. In addition, readers will find a thorough examination of big data analytics, analyzing statistical methods for data analytics and data mining, along with a detailed look at big data intelligence, ubiquitous and mobile computing, and designing intelligence system based on context and situation. Indexing: The books of this series are submitted to EI-Compendex and SCOPUS - Contains contributions from noted scholars in computer science and electrical engineering from around the globe - Provides a broad overview of recent developments in sensor collected intelligence - Edited by a team comprised of leading thinkers in big data analytics


Development Research in Practice

Development Research in Practice

Author: Kristoffer Bjärkefur

Publisher: World Bank Publications

Published: 2021-07-16

Total Pages: 388

ISBN-13: 1464816956

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Development Research in Practice leads the reader through a complete empirical research project, providing links to continuously updated resources on the DIME Wiki as well as illustrative examples from the Demand for Safe Spaces study. The handbook is intended to train users of development data how to handle data effectively, efficiently, and ethically. “In the DIME Analytics Data Handbook, the DIME team has produced an extraordinary public good: a detailed, comprehensive, yet easy-to-read manual for how to manage a data-oriented research project from beginning to end. It offers everything from big-picture guidance on the determinants of high-quality empirical research, to specific practical guidance on how to implement specific workflows—and includes computer code! I think it will prove durably useful to a broad range of researchers in international development and beyond, and I learned new practices that I plan on adopting in my own research group.†? —Marshall Burke, Associate Professor, Department of Earth System Science, and Deputy Director, Center on Food Security and the Environment, Stanford University “Data are the essential ingredient in any research or evaluation project, yet there has been too little attention to standardized practices to ensure high-quality data collection, handling, documentation, and exchange. Development Research in Practice: The DIME Analytics Data Handbook seeks to fill that gap with practical guidance and tools, grounded in ethics and efficiency, for data management at every stage in a research project. This excellent resource sets a new standard for the field and is an essential reference for all empirical researchers.†? —Ruth E. Levine, PhD, CEO, IDinsight “Development Research in Practice: The DIME Analytics Data Handbook is an important resource and a must-read for all development economists, empirical social scientists, and public policy analysts. Based on decades of pioneering work at the World Bank on data collection, measurement, and analysis, the handbook provides valuable tools to allow research teams to more efficiently and transparently manage their work flows—yielding more credible analytical conclusions as a result.†? —Edward Miguel, Oxfam Professor in Environmental and Resource Economics and Faculty Director of the Center for Effective Global Action, University of California, Berkeley “The DIME Analytics Data Handbook is a must-read for any data-driven researcher looking to create credible research outcomes and policy advice. By meticulously describing detailed steps, from project planning via ethical and responsible code and data practices to the publication of research papers and associated replication packages, the DIME handbook makes the complexities of transparent and credible research easier.†? —Lars Vilhuber, Data Editor, American Economic Association, and Executive Director, Labor Dynamics Institute, Cornell University